Project measure / variable:   Jaxpheno2   kidney_L8

ID, description, units MPD:22730   kidney_L8   kidney (left) weight   [g]  at age 8wks  
Data set, strains Jaxpheno2   inbred   11 strains     sex: both     age: 8wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Jaxpheno2 - kidney (left) weight at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means0.116   g 0.179   g
Median of the strain means0.117   g 0.188   g
SD of the strain means± 0.00994 ± 0.0192
Coefficient of variation (CV)0.0857 0.108
Min–max range of strain means0.102   –   0.131   g 0.142   –   0.200   g
Mean sample size per strain7.9   mice 8.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.182 0.182 748.7762 < 0.0001
strain 10 0.0366 0.0037 15.0617 < 0.0001
sex:strain 10 0.0081 0.0008 3.3454 0.0005
Residuals 169 0.0411 0.0002


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 0.107 0.00749   5 0.00335 0.0699 0.0978, 0.115 -0.91
B6.129P2-Apoetm1Unc/J m 0.146 0.0173   5 0.00773 0.118 0.123, 0.167 -1.7
B6D2F1/J f 0.127 0.0118   6 0.00482 0.0929 0.115, 0.145 1.1
B6D2F1/J m 0.187 0.0102   5 0.00458 0.0546 0.171, 0.196 0.43
BALB/cByJ f 0.128 0.0103   10 0.00325 0.0802 0.115, 0.145 1.2
BALB/cByJ m 0.194 0.0147   10 0.00464 0.0758 0.166, 0.216 0.79
BALB/cJ f 0.12 0.00929   10 0.00294 0.0772 0.108, 0.135 0.39
BALB/cJ m 0.188 0.024   10 0.0076 0.128 0.151, 0.225 0.48
C3H/HeJ f 0.112 0.0175   5 0.00781 0.156 0.09, 0.128 -0.41
C3H/HeJ m 0.188 0.0216   5 0.00968 0.115 0.163, 0.21 0.48
C57BL/6J f 0.103 0.00871   15 0.00225 0.0844 0.0826, 0.117 -1.32
C57BL/6J m 0.142 0.0139   15 0.00359 0.098 0.124, 0.169 -1.91
CBA/J f 0.112 0.00632   10 0.002 0.0563 0.104, 0.123 -0.41
CBA/J m 0.188 0.0132   15 0.00342 0.0705 0.172, 0.212 0.48
DBA/2J f 0.102 0.0118   10 0.00373 0.115 0.09, 0.127 -1.42
DBA/2J m 0.167 0.0266   15 0.00686 0.159 0.131, 0.233 -0.61
FVB/NJ f 0.131 0.00884   5 0.00395 0.0674 0.117, 0.14 1.5
FVB/NJ m 0.2 0.0196   5 0.00876 0.0977 0.172, 0.225 1.11
NOD.CB17-Prkdcscid/J f 0.118 0.00691   5 0.00309 0.0584 0.111, 0.127 0.19
NOD.CB17-Prkdcscid/J m 0.176 0.00718   5 0.00321 0.0408 0.169, 0.188 -0.14
NOD/ShiLtJ f 0.117 0.0148   10 0.00469 0.127 0.103, 0.152 0.09
NOD/ShiLtJ m 0.19 0.0227   10 0.00718 0.119 0.151, 0.221 0.59


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 0.1072 0.007 0.1209 0.0934
B6.129P2-Apoetm1Unc/J m 0.1462 0.007 0.16 0.1324
B6D2F1/J f 0.127 0.0064 0.1396 0.1144
B6D2F1/J m 0.1874 0.007 0.2012 0.1736
BALB/cByJ f 0.1283 0.0049 0.138 0.1186
BALB/cByJ m 0.1936 0.0049 0.2033 0.1839
BALB/cJ f 0.1203 0.0049 0.13 0.1106
BALB/cJ m 0.1884 0.0049 0.1981 0.1787
C3H/HeJ f 0.1122 0.007 0.1259 0.0984
C3H/HeJ m 0.1882 0.007 0.202 0.1744
C57BL/6J f 0.1032 0.004 0.1111 0.0952
C57BL/6J m 0.1419 0.004 0.1498 0.1339
CBA/J f 0.1122 0.0049 0.1219 0.1025
CBA/J m 0.1877 0.004 0.1957 0.1798
DBA/2J f 0.102 0.0049 0.1118 0.0923
DBA/2J m 0.167 0.004 0.1749 0.1591
FVB/NJ f 0.1312 0.007 0.145 0.1174
FVB/NJ m 0.2004 0.007 0.2142 0.1866
NOD.CB17-Prkdcscid/J f 0.1182 0.007 0.132 0.1044
NOD.CB17-Prkdcscid/J m 0.176 0.007 0.1898 0.1622
NOD/ShiLtJ f 0.1168 0.0049 0.1265 0.1071
NOD/ShiLtJ m 0.1904 0.0049 0.2001 0.1807


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 0.1267 0.0049 0.1364 0.1169
B6D2F1/J both 0.1572 0.0047 0.1665 0.1479
BALB/cByJ both 0.1609 0.0035 0.1678 0.1541
BALB/cJ both 0.1543 0.0035 0.1612 0.1475
C3H/HeJ both 0.1502 0.0049 0.1599 0.1405
C57BL/6J both 0.1225 0.0028 0.1281 0.1169
CBA/J both 0.15 0.0032 0.1562 0.1437
DBA/2J both 0.1345 0.0032 0.1408 0.1282
FVB/NJ both 0.1658 0.0049 0.1755 0.1561
NOD.CB17-Prkdcscid/J both 0.1471 0.0049 0.1568 0.1374
NOD/ShiLtJ both 0.1536 0.0035 0.1605 0.1467




  GWAS USING LINEAR MIXED MODELS