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Project measure / variable:   Brown2   acq_dist_d3

ID, description, units MPD:22505   acq_dist_d3   acquistion training mean distance traveled to find hidden platform, day 3   [cm]  
Data set, strains Brown2   inbred   14 strains     sex: both     age: 10-18wks
Procedure Morris water maze
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  STRAIN COMPARISON PLOT
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Brown2 - acquistion training mean distance traveled to find hidden platform, day 3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains14 strains
Mean of the strain means711   cm 774   cm
Median of the strain means677   cm 773   cm
SD of the strain means± 284 ± 276
Coefficient of variation (CV)0.399 0.356
Min–max range of strain means300   –   1412   cm 275   –   1231   cm
Mean sample size per strain9.5   mice 9.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 139161.3791 139161.3791 2.4517 0.1188
strain 12 11982974.1481 998581.179 17.5927 < 0.0001
sex:strain 12 1080833.2964 90069.4414 1.5868 0.0968
Residuals 219 12430708.1152 56761.2243


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 300.0 153.0   7 57.8 0.509 117.0, 530.0 -1.45
129S1/SvImJ m 275.0 128.0   7 48.5 0.467 167.0, 529.0 -1.81
A/J f 677.0 215.0   6 87.7 0.317 356.0, 992.0 -0.12
A/J m 931.0 224.0   18 52.8 0.24 536.0, 1443.0 0.57
AKR/J f 603.0 279.0   12 80.6 0.463 246.0, 1060.0 -0.38
AKR/J m 703.0 240.0   12 69.4 0.342 351.0, 1064.0 -0.26
BALB/cByJ f 530.0 156.0   15 40.4 0.295 299.0, 936.0 -0.64
BALB/cByJ m 630.0 175.0   6 71.5 0.278 352.0, 819.0 -0.52
BALB/cJ f 686.0 233.0   14 62.3 0.34 330.0, 1034.0 -0.09
BALB/cJ m 950.0 286.0   10 90.4 0.301 580.0, 1406.0 0.64
C3H/HeJ f 885.0 306.0   10 96.6 0.345 410.0, 1382.0 0.61
C3H/HeJ m 847.0 278.0   9 92.6 0.328 531.0, 1307.0 0.27
C57BL/6J f 436.0 259.0   7 97.9 0.593 178.0, 924.0 -0.97
C57BL/6J m 472.0 328.0   7 124.0 0.695 134.0, 1022.0 -1.09
CAST/EiJ f 690.0 253.0   10 79.9 0.366 154.0, 990.0 -0.07
CAST/EiJ m 801.0 141.0   11 42.5 0.176 591.0, 1026.0 0.1
DBA/2J f 676.0 234.0   6 95.5 0.346 466.0, 1112.0 -0.12
DBA/2J m 489.0 161.0   6 65.7 0.329 287.0, 657.0 -1.03
FVB/NJ f 1412.0 234.0   6 95.6 0.166 1058.0, 1633.0 2.47
FVB/NJ m 1231.0 452.0   6 184.0 0.367 554.0, 1920.0 1.66
MOLF/EiJ f 985.0 205.0   11 61.9 0.208 486.0, 1247.0 0.97
MOLF/EiJ m 1019.0 380.0   4 190.0 0.373 665.0, 1489.0 0.89
SJL/J f 874.0 261.0   12 75.5 0.299 535.0, 1431.0 0.57
SJL/J m 745.0 213.0   12 61.5 0.286 286.0, 1082.0 -0.1
SM/J f 488.0 147.0   9 49.1 0.302 304.0, 798.0 -0.79
SM/J m 560.0 196.0   12 56.6 0.35 248.0, 847.0 -0.78
SPRET/EiJ m 1177.0 236.0   12 68.0 0.2 658.0, 1487.0 1.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 300.2857 90.0486 477.7584 122.813
129S1/SvImJ m 275.1429 90.0486 452.6156 97.6701
A/J f 677.0 97.2636 868.6924 485.3076
A/J m 931.0556 56.1552 1041.7292 820.3819
AKR/J f 602.75 68.7757 738.297 467.203
AKR/J m 703.1667 68.7757 838.7137 567.6196
BALB/cByJ f 530.4 61.5149 651.6369 409.1631
BALB/cByJ m 629.8333 97.2636 821.5258 438.1409
BALB/cJ f 685.7143 63.674 811.2065 560.2221
BALB/cJ m 950.2 75.34 1098.6843 801.7157
C3H/HeJ f 884.9 75.34 1033.3843 736.4157
C3H/HeJ m 847.0 79.4154 1003.5162 690.4838
C57BL/6J f 436.2857 90.0486 613.7584 258.813
C57BL/6J m 471.7143 90.0486 649.187 294.2416
CAST/EiJ f 690.5 75.34 838.9843 542.0157
CAST/EiJ m 800.7273 71.8339 942.3015 659.153
DBA/2J f 676.3333 97.2636 868.0258 484.6409
DBA/2J m 489.1667 97.2636 680.8591 297.4742
FVB/NJ f 1412.3333 97.2636 1604.0258 1220.6409
FVB/NJ m 1231.3333 97.2636 1423.0258 1039.6409
MOLF/EiJ f 985.0 71.8339 1126.5743 843.4257
MOLF/EiJ m 1019.0 119.1231 1253.7743 784.2257
SJL/J f 873.8333 68.7757 1009.3804 738.2863
SJL/J m 745.25 68.7757 880.797 609.703
SM/J f 487.5556 79.4154 644.0718 331.0393
SM/J m 560.3333 68.7757 695.8804 424.7863


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 287.7143 63.674 413.2065 162.2221
A/J both 804.0278 56.1552 914.7015 693.3541
AKR/J both 652.9583 48.6318 748.8046 557.1121
BALB/cByJ both 580.1167 57.5419 693.5234 466.7099
BALB/cJ both 817.9571 49.3216 915.163 720.7513
C3H/HeJ both 865.95 54.7333 973.8214 758.0786
C57BL/6J both 454.0 63.674 579.4922 328.5078
CAST/EiJ both 745.6136 52.0486 848.1939 643.0333
DBA/2J both 582.75 68.7757 718.297 447.203
FVB/NJ both 1321.8333 68.7757 1457.3804 1186.2863
MOLF/EiJ both 1002.0 69.5529 1139.0787 864.9213
SJL/J both 809.5417 48.6318 905.3879 713.6954
SM/J both 523.9444 52.5283 627.4702 420.4187




  GWAS USING LINEAR MIXED MODELS