Project measure / variable:   Jaxpheno1   tissue_mass16

ID, description, units MPD:22411   tissue_mass16   total body tissue mass, head excluded   [g]  at age 16wks  
Data set, strains Jaxpheno1   inbred   9 strains     sex: both     age: 16wks
Procedure DXA
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Jaxpheno1 - total body tissue mass, head excluded at age 16wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means23.4   g 29.8   g
Median of the strain means23.5   g 29.2   g
SD of the strain means± 2.09 ± 2.20
Coefficient of variation (CV)0.0893 0.0739
Min–max range of strain means19.9   –   26.4   g 27.1   –   33.5   g
Mean sample size per strain7.1   mice 7.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1585.9246 1585.9246 271.3745 < 0.0001
strain 8 587.9498 73.4937 12.5758 < 0.0001
sex:strain 8 61.2398 7.655 1.3099 0.2448
Residuals 122 712.9733 5.844


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6D2F1/J f 26.4 3.28   5 1.47 0.124 21.9, 29.5 1.43
B6D2F1/J m 33.4 1.83   5 0.819 0.0548 31.2, 35.6 1.62
BALB/cByJ f 23.5 1.72   10 0.545 0.0732 20.1, 25.4 0.04
BALB/cByJ m 29.4 1.02   10 0.321 0.0346 27.8, 31.0 -0.19
C3H/HeJ f 21.8 1.72   5 0.767 0.0788 19.8, 24.1 -0.77
C3H/HeJ m 29.0 3.12   5 1.4 0.108 25.6, 32.5 -0.37
C57BL/6J f 19.9 2.18   15 0.564 0.11 17.2, 25.7 -1.68
C57BL/6J m 27.1 1.54   15 0.396 0.0567 24.2, 30.0 -1.24
CBA/J f 24.9 4.09   10 1.29 0.164 19.6, 30.6 0.71
CBA/J m 33.5 1.64   10 0.519 0.0489 31.4, 35.6 1.67
DBA/2J f 25.2 3.04   5 1.36 0.12 20.6, 28.3 0.86
DBA/2J m 29.7 0.559   5 0.25 0.0189 29.0, 30.1 -0.06
FVB/NJ f 23.2 2.12   5 0.946 0.0913 21.3, 26.8 -0.1
FVB/NJ m 28.0 1.81   5 0.808 0.0644 25.8, 29.7 -0.83
NOD.CB17-Prkdcscid/J f 24.5 1.65   5 0.74 0.0675 23.4, 27.3 0.52
NOD.CB17-Prkdcscid/J m 29.2 2.38   5 1.06 0.0814 26.6, 32.2 -0.28
NOD/ShiLtJ f 21.3 2.26   10 0.713 0.106 17.4, 24.2 -1.01
NOD/ShiLtJ m 29.1 4.04   10 1.28 0.139 20.5, 34.3 -0.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 26.4 1.0811 28.5402 24.2598
B6D2F1/J m 33.38 1.0811 35.5202 31.2398
BALB/cByJ f 23.51 0.7645 25.0233 21.9967
BALB/cByJ m 29.38 0.7645 30.8933 27.8667
C3H/HeJ f 21.78 1.0811 23.9202 19.6398
C3H/HeJ m 29.04 1.0811 31.1802 26.8998
C57BL/6J f 19.9133 0.6242 21.149 18.6777
C57BL/6J m 27.08 0.6242 28.3156 25.8444
CBA/J f 24.93 0.7645 26.4433 23.4167
CBA/J m 33.5 0.7645 35.0133 31.9867
DBA/2J f 25.24 1.0811 27.3802 23.0998
DBA/2J m 29.66 1.0811 31.8002 27.5198
FVB/NJ f 23.18 1.0811 25.3202 21.0398
FVB/NJ m 28.04 1.0811 30.1802 25.8998
NOD.CB17-Prkdcscid/J f 24.52 1.0811 26.6602 22.3798
NOD.CB17-Prkdcscid/J m 29.22 1.0811 31.3602 27.0798
NOD/ShiLtJ f 21.29 0.7645 22.8033 19.7767
NOD/ShiLtJ m 29.11 0.7645 30.6233 27.5967


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J both 29.89 0.7645 31.4033 28.3767
BALB/cByJ both 26.445 0.5406 27.5151 25.3749
C3H/HeJ both 25.41 0.7645 26.9233 23.8967
C57BL/6J both 23.4967 0.4414 24.3704 22.6229
CBA/J both 29.215 0.5406 30.2851 28.1449
DBA/2J both 27.45 0.7645 28.9633 25.9367
FVB/NJ both 25.61 0.7645 27.1233 24.0967
NOD.CB17-Prkdcscid/J both 26.87 0.7645 28.3833 25.3567
NOD/ShiLtJ both 25.2 0.5406 26.2701 24.1299




  GWAS USING LINEAR MIXED MODELS