Project measure / variable:   Puk1   axial_lengthL

ID, description, units MPD:22201   axial_lengthL   eye axial length   [mm]  left eye  
Data set, strains Puk1   inbred   4 strains     sex: both     age: 13wks
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  STRAIN COMPARISON PLOT
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Puk1 - eye axial length left eye



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested4 strains4 strains
Mean of the strain means3.51   mm 3.54   mm
Median of the strain means3.51   mm 3.54   mm
SD of the strain means± 0.0250 ± 0.0287
Coefficient of variation (CV)0.00712 0.00811
Min–max range of strain means3.48   –   3.54   mm 3.51   –   3.58   mm
Mean sample size per strain7.8   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0151 0.0151 20.0341 < 0.0001
strain 3 0.0217 0.0072 9.5899 < 0.0001
sex:strain 3 0.0091 0.003 4.0059 0.0119
Residuals 55 0.0415 0.0008


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPas f 3.48 0.0258   10 0.00817 0.00742 3.44, 3.52 -1.3
129S2/SvPas m 3.51 0.027   10 0.00854 0.00769 3.46, 3.54 -1.13
BALB/cByJ f 3.52 0.0339   9 0.0113 0.00962 3.47, 3.57 0.3
BALB/cByJ m 3.54 0.0196   8 0.00693 0.00554 3.51, 3.57 -0.09
C3HeB/FeJ f 3.54 0.032   4 0.016 0.00904 3.51, 3.57 1.1
C3HeB/FeJ m 3.54 0.0167   6 0.00683 0.00473 3.52, 3.56 -0.09
C57BL/6J f 3.51 0.0296   8 0.0105 0.00845 3.46, 3.56 -0.1
C57BL/6J m 3.58 0.0302   8 0.0107 0.00846 3.52, 3.62 1.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas f 3.483 0.0087 3.5004 3.4656
129S2/SvPas m 3.512 0.0087 3.5294 3.4946
BALB/cByJ f 3.5233 0.0092 3.5417 3.505
BALB/cByJ m 3.5387 0.0097 3.5582 3.5193
C3HeB/FeJ f 3.5425 0.0137 3.57 3.515
C3HeB/FeJ m 3.54 0.0112 3.5625 3.5175
C57BL/6J f 3.5075 0.0097 3.527 3.488
C57BL/6J m 3.575 0.0097 3.5945 3.5555


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas both 3.4975 0.0061 3.5098 3.4852
BALB/cByJ both 3.531 0.0067 3.5444 3.5177
C3HeB/FeJ both 3.5412 0.0089 3.559 3.5235
C57BL/6J both 3.5412 0.0069 3.555 3.5275




GWAS analysis not available: SNP data is not available for enough strains (at least 4)