Project measure / variable:   Lake2   hindlimb_dorsal

ID, description, units MPD:21743   hindlimb_dorsal   hindlimb splay evaluation via dorso-ventral view in arena (score 0-2)   [score]  
Data set, strains Lake2   B6.A consomic w/par   23 strains     sex: both     age: 8wks
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  STRAIN COMPARISON PLOT
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Lake2 - hindlimb splay evaluation via dorso-ventral view in arena (score 0-2)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means0.0467   score 0.0109   score
Median of the strain means0   score 0   score
SD of the strain means± 0.120 ± 0.0360
Coefficient of variation (CV)2.57 3.31
Min–max range of strain means0   –   0.500   score 0   –   0.125   score
Mean sample size per strain8.1   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.3496 0.3496 10.6286 0.0012
strain 22 2.9014 0.1319 4.0097 < 0.0001
sex:strain 22 1.5246 0.0693 2.107 0.003
Residuals 320 10.525 0.0329


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 0.2 0.414   15 0.107 2.07 1.28
A/J m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr1 f 0.0 0.0   4 0.0 0.0 -0.39
B6.A-Chr1 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr10 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr10 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr11 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr11 m 0.0 0.0   10 0.0 0.0 -0.3
B6.A-Chr12 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr12 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr13 f 0.0 0.0   5 0.0 0.0 -0.39
B6.A-Chr13 m 0.0 0.0   7 0.0 0.0 -0.3
B6.A-Chr14 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr14 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr15 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr15 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr16 f 0.25 0.463   8 0.164 1.85 1.69
B6.A-Chr16 m 0.125 0.354   8 0.125 2.83 3.17
B6.A-Chr17 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr17 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr18 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr18 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr19 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr19 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr2 f 0.125 0.354   8 0.125 2.83 0.65
B6.A-Chr2 m 0.0 0.0   4 0.0 0.0 -0.3
B6.A-Chr3 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr3 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr4 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr4 m 0.125 0.354   8 0.125 2.83 3.17
B6.A-Chr5 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr5 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr6 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr6 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr7 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr7 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr8 f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-Chr8 m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-Chr9 f 0.0 0.0   7 0.0 0.0 -0.39
B6.A-Chr9 m 0.0 0.0   2   0.0 0.0 -0.3
B6.A-ChrX f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-ChrX m 0.0 0.0   8 0.0 0.0 -0.3
B6.A-ChrY f 0.0 0.0   8 0.0 0.0 -0.39
B6.A-ChrY m 0.0 0.0   8 0.0 0.0 -0.3
C57BL/6J f 0.5 0.516   16 0.129 1.03 3.77
C57BL/6J m 0.0 0.0   8 0.0 0.0 -0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 0.2 0.0468 0.2921 0.1079
A/J m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr1 f 0.0 0.0907 0.1784 -0.1784
B6.A-Chr1 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr10 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr10 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr11 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr11 m 0.0 0.0574 0.1128 -0.1128
B6.A-Chr12 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr12 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr13 f 0.0 0.0811 0.1596 -0.1596
B6.A-Chr13 m 0.0 0.0685 0.1349 -0.1349
B6.A-Chr14 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr14 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr15 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr15 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr16 f 0.25 0.0641 0.3761 0.1239
B6.A-Chr16 m 0.125 0.0641 0.2511 -0.0011
B6.A-Chr17 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr17 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr18 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr18 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr19 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr19 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr2 f 0.125 0.0641 0.2511 -0.0011
B6.A-Chr2 m 0.0 0.0907 0.1784 -0.1784
B6.A-Chr3 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr3 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr4 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr4 m 0.125 0.0641 0.2511 -0.0011
B6.A-Chr5 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr5 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr6 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr6 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr7 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr7 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr8 f 0.0 0.0641 0.1261 -0.1261
B6.A-Chr8 m 0.0 0.0641 0.1261 -0.1261
B6.A-Chr9 f 0.0 0.0685 0.1349 -0.1349
B6.A-Chr9 m 0.0 0.1282 0.2523 -0.2523
B6.A-ChrX f 0.0 0.0641 0.1261 -0.1261
B6.A-ChrX m 0.0 0.0641 0.1261 -0.1261
B6.A-ChrY f 0.0 0.0641 0.1261 -0.1261
B6.A-ChrY m 0.0 0.0641 0.1261 -0.1261
C57BL/6J f 0.5 0.0453 0.5892 0.4108
C57BL/6J m 0.0 0.0641 0.1261 -0.1261


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 0.1 0.0397 0.1781 0.0219
B6.A-Chr1 both 0.0 0.0555 0.1092 -0.1092
B6.A-Chr10 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr11 both 0.0 0.043 0.0846 -0.0846
B6.A-Chr12 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr13 both 0.0 0.0531 0.1045 -0.1045
B6.A-Chr14 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr15 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr16 both 0.1875 0.0453 0.2767 0.0983
B6.A-Chr17 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr18 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr19 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr2 both 0.0625 0.0555 0.1717 -0.0467
B6.A-Chr3 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr4 both 0.0625 0.0453 0.1517 -0.0267
B6.A-Chr5 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr6 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr7 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr8 both 0.0 0.0453 0.0892 -0.0892
B6.A-Chr9 both 0.0 0.0727 0.143 -0.143
B6.A-ChrX both 0.0 0.0453 0.0892 -0.0892
B6.A-ChrY both 0.0 0.0453 0.0892 -0.0892
C57BL/6J both 0.25 0.0393 0.3273 0.1727




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA