Project measure / variable:   Lake1   TG

ID, description, units MPD:19928   TG   triglycerides (plasma TG, 4h fast)   [mg/dL]  
Data set, strains Lake1   B6.A consomic w/par   23 strains     sex: both     age: 8wks
Procedure lipid profile
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  STRAIN COMPARISON PLOT
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Lake1 - triglycerides (plasma TG, 4h fast)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means98.4   mg/dL 124   mg/dL
Median of the strain means96.9   mg/dL 125   mg/dL
SD of the strain means± 12.0 ± 17.3
Coefficient of variation (CV)0.122 0.139
Min–max range of strain means70.8   –   122   mg/dL 93.8   –   161   mg/dL
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 64017.0664 64017.0664 161.1068 < 0.0001
strain 22 53241.3518 2420.0614 6.0904 < 0.0001
sex:strain 22 24728.3015 1124.0137 2.8287 < 0.0001
Residuals 327 129936.0417 397.3579


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 120.0 25.6   8 9.04 0.214 81.0, 152.0 1.8
A/J m 161.0 35.2   8 12.4 0.218 116.0, 216.0 2.12
B6.A-Chr1 f 96.0 18.8   8 6.64 0.196 68.0, 126.0 -0.2
B6.A-Chr1 m 129.0 22.5   8 7.96 0.174 106.0, 172.0 0.26
B6.A-Chr10 f 91.8 8.6   8 3.04 0.0937 79.0, 108.0 -0.55
B6.A-Chr10 m 116.0 11.0   8 3.89 0.0951 100.0, 131.0 -0.49
B6.A-Chr11 f 90.2 21.2   8 7.48 0.235 67.0, 123.0 -0.68
B6.A-Chr11 m 125.0 27.0   8 9.53 0.216 93.0, 166.0 0.03
B6.A-Chr12 f 88.9 9.14   8 3.23 0.103 77.0, 102.0 -0.79
B6.A-Chr12 m 129.0 22.6   8 8.0 0.175 95.0, 161.0 0.26
B6.A-Chr13 f 70.8 15.3   8 5.42 0.217 50.0, 97.0 -2.3
B6.A-Chr13 m 100.0 34.9   8 12.3 0.348 69.0, 165.0 -1.42
B6.A-Chr14 f 87.8 18.7   8 6.62 0.213 68.0, 127.0 -0.88
B6.A-Chr14 m 140.0 15.0   8 5.32 0.108 116.0, 158.0 0.9
B6.A-Chr15 f 88.0 9.42   9 3.14 0.107 77.0, 103.0 -0.87
B6.A-Chr15 m 107.0 11.3   8 4.0 0.106 93.0, 125.0 -1.01
B6.A-Chr16 f 84.0 11.6   8 4.09 0.138 70.0, 103.0 -1.2
B6.A-Chr16 m 124.0 17.8   8 6.29 0.143 90.0, 153.0 -0.03
B6.A-Chr17 f 96.4 19.6   8 6.94 0.204 67.0, 126.0 -0.17
B6.A-Chr17 m 93.8 6.04   8 2.14 0.0644 83.0, 104.0 -1.78
B6.A-Chr18 f 96.9 18.3   8 6.47 0.189 68.0, 122.0 -0.13
B6.A-Chr18 m 132.0 19.4   8 6.84 0.147 97.0, 163.0 0.44
B6.A-Chr19 f 99.6 23.5   8 8.32 0.236 68.0, 130.0 0.1
B6.A-Chr19 m 141.0 26.0   8 9.2 0.185 109.0, 189.0 0.96
B6.A-Chr2 f 122.0 16.5   8 5.84 0.135 92.0, 144.0 1.96
B6.A-Chr2 m 146.0 23.9   8 8.44 0.163 110.0, 179.0 1.25
B6.A-Chr3 f 104.0 14.9   8 5.28 0.144 83.0, 129.0 0.47
B6.A-Chr3 m 128.0 24.7   8 8.72 0.193 98.0, 176.0 0.21
B6.A-Chr4 f 95.8 16.9   8 5.97 0.176 67.0, 120.0 -0.22
B6.A-Chr4 m 95.4 11.7   8 4.15 0.123 89.0, 124.0 -1.68
B6.A-Chr5 f 92.4 9.78   8 3.46 0.106 81.0, 110.0 -0.5
B6.A-Chr5 m 145.0 28.5   8 10.1 0.197 117.0, 191.0 1.19
B6.A-Chr6 f 102.0 10.1   8 3.58 0.0992 90.0, 117.0 0.3
B6.A-Chr6 m 141.0 28.1   8 9.92 0.199 95.0, 181.0 0.96
B6.A-Chr7 f 98.2 19.1   8 6.74 0.194 82.0, 134.0 -0.02
B6.A-Chr7 m 120.0 15.4   8 5.44 0.128 92.0, 139.0 -0.26
B6.A-Chr8 f 106.0 20.6   8 7.29 0.194 83.0, 142.0 0.63
B6.A-Chr8 m 131.0 17.6   12 5.08 0.135 108.0, 164.0 0.38
B6.A-Chr9 f 120.0 14.9   8 5.26 0.124 100.0, 144.0 1.8
B6.A-Chr9 m 115.0 25.0   8 8.85 0.217 92.0, 162.0 -0.55
B6.A-ChrX f 106.0 24.9   8 8.81 0.235 76.0, 135.0 0.63
B6.A-ChrX m 103.0 11.9   8 4.21 0.116 85.0, 127.0 -1.24
B6.A-ChrY f 107.0 18.8   8 6.64 0.176 79.0, 140.0 0.72
B6.A-ChrY m 123.0 26.8   8 9.47 0.217 93.0, 163.0 -0.08
C57BL/6J f 99.6 22.7   8 8.03 0.228 70.0, 136.0 0.1
C57BL/6J m 117.0 13.3   8 4.71 0.114 97.0, 133.0 -0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 119.5 7.0477 133.3645 105.6355
A/J m 161.375 7.0477 175.2395 147.5105
B6.A-Chr1 f 96.0 7.0477 109.8645 82.1355
B6.A-Chr1 m 129.0 7.0477 142.8645 115.1355
B6.A-Chr10 f 91.75 7.0477 105.6145 77.8855
B6.A-Chr10 m 115.75 7.0477 129.6145 101.8855
B6.A-Chr11 f 90.25 7.0477 104.1145 76.3855
B6.A-Chr11 m 124.75 7.0477 138.6145 110.8855
B6.A-Chr12 f 88.875 7.0477 102.7395 75.0105
B6.A-Chr12 m 129.0 7.0477 142.8645 115.1355
B6.A-Chr13 f 70.75 7.0477 84.6145 56.8855
B6.A-Chr13 m 100.25 7.0477 114.1145 86.3855
B6.A-Chr14 f 87.75 7.0477 101.6145 73.8855
B6.A-Chr14 m 139.5 7.0477 153.3645 125.6355
B6.A-Chr15 f 88.0 6.6446 101.0716 74.9284
B6.A-Chr15 m 107.125 7.0477 120.9895 93.2605
B6.A-Chr16 f 84.0 7.0477 97.8645 70.1355
B6.A-Chr16 m 124.0 7.0477 137.8645 110.1355
B6.A-Chr17 f 96.375 7.0477 110.2395 82.5105
B6.A-Chr17 m 93.75 7.0477 107.6145 79.8855
B6.A-Chr18 f 96.875 7.0477 110.7395 83.0105
B6.A-Chr18 m 131.75 7.0477 145.6145 117.8855
B6.A-Chr19 f 99.625 7.0477 113.4895 85.7605
B6.A-Chr19 m 140.875 7.0477 154.7395 127.0105
B6.A-Chr2 f 122.0 7.0477 135.8645 108.1355
B6.A-Chr2 m 146.5 7.0477 160.3645 132.6355
B6.A-Chr3 f 104.0 7.0477 117.8645 90.1355
B6.A-Chr3 m 127.625 7.0477 141.4895 113.7605
B6.A-Chr4 f 95.75 7.0477 109.6145 81.8855
B6.A-Chr4 m 95.375 7.0477 109.2395 81.5105
B6.A-Chr5 f 92.375 7.0477 106.2395 78.5105
B6.A-Chr5 m 144.75 7.0477 158.6145 130.8855
B6.A-Chr6 f 102.125 7.0477 115.9895 88.2605
B6.A-Chr6 m 140.875 7.0477 154.7395 127.0105
B6.A-Chr7 f 98.25 7.0477 112.1145 84.3855
B6.A-Chr7 m 120.25 7.0477 134.1145 106.3855
B6.A-Chr8 f 106.125 7.0477 119.9895 92.2605
B6.A-Chr8 m 130.6667 5.7544 141.987 119.3463
B6.A-Chr9 f 120.0 7.0477 133.8645 106.1355
B6.A-Chr9 m 115.125 7.0477 128.9895 101.2605
B6.A-ChrX f 105.875 7.0477 119.7395 92.0105
B6.A-ChrX m 102.75 7.0477 116.6145 88.8855
B6.A-ChrY f 107.0 7.0477 120.8645 93.1355
B6.A-ChrY m 123.375 7.0477 137.2395 109.5105
C57BL/6J f 99.625 7.0477 113.4895 85.7605
C57BL/6J m 116.75 7.0477 130.6145 102.8855


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 140.4375 4.9835 150.2412 130.6338
B6.A-Chr1 both 112.5 4.9835 122.3037 102.6963
B6.A-Chr10 both 103.75 4.9835 113.5537 93.9463
B6.A-Chr11 both 107.5 4.9835 117.3037 97.6963
B6.A-Chr12 both 108.9375 4.9835 118.7412 99.1338
B6.A-Chr13 both 85.5 4.9835 95.3037 75.6963
B6.A-Chr14 both 113.625 4.9835 123.4287 103.8213
B6.A-Chr15 both 97.5625 4.8431 107.09 88.035
B6.A-Chr16 both 104.0 4.9835 113.8037 94.1963
B6.A-Chr17 both 95.0625 4.9835 104.8662 85.2588
B6.A-Chr18 both 114.3125 4.9835 124.1162 104.5088
B6.A-Chr19 both 120.25 4.9835 130.0537 110.4463
B6.A-Chr2 both 134.25 4.9835 144.0537 124.4463
B6.A-Chr3 both 115.8125 4.9835 125.6162 106.0088
B6.A-Chr4 both 95.5625 4.9835 105.3662 85.7588
B6.A-Chr5 both 118.5625 4.9835 128.3662 108.7588
B6.A-Chr6 both 121.5 4.9835 131.3037 111.6963
B6.A-Chr7 both 109.25 4.9835 119.0537 99.4463
B6.A-Chr8 both 118.3958 4.5493 127.3453 109.4463
B6.A-Chr9 both 117.5625 4.9835 127.3662 107.7588
B6.A-ChrX both 104.3125 4.9835 114.1162 94.5088
B6.A-ChrY both 115.1875 4.9835 124.9912 105.3838
C57BL/6J both 108.1875 4.9835 117.9912 98.3838




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA