Project measure / variable:   Taft1   pct_dead_fresh

ID, description, units MPD:19322   pct_dead_fresh   resorbed fetuses, percentage of fresh ET   [%]  
Data set, strains Taft1   inbred   10 strains     sex: f
Procedure assisted reproduction
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  STRAIN COMPARISON PLOT
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Taft1 - resorbed fetuses, percentage of fresh ET



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested10 strains
Mean of the strain means1.39   %
Median of the strain means0.646   %
SD of the strain means± 1.56
Coefficient of variation (CV)1.12
Min–max range of strain means0   –   3.50   %
Mean sample size per strain13.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 9 298.3704 33.1523 2.2169 0.025
Residuals 125 1869.3333 14.9547


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 0.0   13 0.0 0.0 -0.89
A/J f 0.0 0.0   14 0.0 0.0 -0.89
BALB/cByJ f 3.5 6.59   16 1.65 1.88 1.36
BALB/cJ f 0.0 0.0   10 0.0 0.0 -0.89
C3H/HeJ f 2.58 4.68   12 1.35 1.81 0.76
C57BL/6J f 3.4 4.98   15 1.29 1.47 1.29
DBA/2J f 0.667 2.58   15 0.667 3.87 -0.46
FVB/NJ f 0.625 2.5   16 0.625 4.0 -0.49
NOD/ShiLtJ f 3.13 5.62   15 1.45 1.79 1.12
SJL/J f 0.0 0.0   9 0.0 0.0 -0.89


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 1.0725 2.1227 -2.1227
A/J f 0.0 1.0335 2.0455 -2.0455
BALB/cByJ f 3.5 0.9668 5.4134 1.5866
BALB/cJ f 0.0 1.2229 2.4203 -2.4203
C3H/HeJ f 2.5833 1.1163 4.7927 0.374
C57BL/6J f 3.4 0.9985 5.3761 1.4239
DBA/2J f 0.6667 0.9985 2.6428 -1.3095
FVB/NJ f 0.625 0.9668 2.5384 -1.2884
NOD/ShiLtJ f 3.1333 0.9985 5.1095 1.1572
SJL/J f 0.0 1.289 2.5512 -2.5512




  GWAS USING LINEAR MIXED MODELS