Project measure / variable:   Jaxwest1   HR

ID, description, units MPD:15101   HR   heart rate   [n/min]  
Data set, strains Jaxwest1   inbred   7 strains     sex: both     age: 8-10wks
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  STRAIN COMPARISON PLOT
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Jaxwest1 - heart rate



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains7 strains
Mean of the strain means698   n/min 716   n/min
Median of the strain means691   n/min 719   n/min
SD of the strain means± 84.4 ± 45.0
Coefficient of variation (CV)0.121 0.0629
Min–max range of strain means569   –   854   n/min 657   –   776   n/min
Mean sample size per strain7.9   mice 7.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6215.6905 6215.6905 1.5904 0.2104
strain 6 341460.3478 56910.058 14.5617 < 0.0001
sex:strain 6 80529.3036 13421.5506 3.4342 0.0041
Residuals 94 367370.7321 3908.1993


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 724.0 26.6   8 9.41 0.0368 669.0, 750.0 0.31
129S1/SvImJ m 744.0 28.6   8 10.1 0.0384 717.0, 810.0 0.63
A/J f 692.0 54.7   8 19.3 0.079 577.0, 740.0 -0.07
A/J m 669.0 96.9   8 34.3 0.145 524.0, 792.0 -1.04
BALB/cJ f 569.0 85.3   7 32.2 0.15 440.0, 671.0 -1.53
BALB/cJ m 657.0 51.0   8 18.0 0.0776 569.0, 718.0 -1.3
C57BL/6J f 669.0 57.5   8 20.3 0.086 589.0, 730.0 -0.34
C57BL/6J m 754.0 41.4   7 15.6 0.0548 681.0, 810.0 0.85
DBA/2J f 686.0 60.0   8 21.2 0.0874 600.0, 742.0 -0.14
DBA/2J m 691.0 74.6   7 28.2 0.108 538.0, 773.0 -0.55
NOD/ShiLtJ f 854.0 15.1   8 5.34 0.0177 832.0, 871.0 1.85
NOD/ShiLtJ m 776.0 73.5   8 26.0 0.0947 654.0, 848.0 1.34
SJL/J f 691.0 41.3   8 14.6 0.0597 629.0, 742.0 -0.08
SJL/J m 719.0 104.0   7 39.3 0.145 514.0, 812.0 0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 723.5 22.1026 767.3852 679.6148
129S1/SvImJ m 743.625 22.1026 787.5102 699.7398
A/J f 691.875 22.1026 735.7602 647.9898
A/J m 669.125 22.1026 713.0102 625.2398
BALB/cJ f 568.5714 23.6287 615.4867 521.6561
BALB/cJ m 656.75 22.1026 700.6352 612.8648
C57BL/6J f 668.625 22.1026 712.5102 624.7398
C57BL/6J m 754.4286 23.6287 801.3439 707.5133
DBA/2J f 686.5 22.1026 730.3852 642.6148
DBA/2J m 691.0 23.6287 737.9153 644.0847
NOD/ShiLtJ f 854.5 22.1026 898.3852 810.6148
NOD/ShiLtJ m 775.875 22.1026 819.7602 731.9898
SJL/J f 691.0 22.1026 734.8852 647.1148
SJL/J m 718.7143 23.6287 765.6296 671.799


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 733.5625 15.6289 764.594 702.531
A/J both 680.5 15.6289 711.5315 649.4685
BALB/cJ both 612.6607 16.1774 644.7814 580.54
C57BL/6J both 711.5268 16.1774 743.6475 679.4061
DBA/2J both 688.75 16.1774 720.8707 656.6293
NOD/ShiLtJ both 815.1875 15.6289 846.219 784.156
SJL/J both 704.8571 16.1774 736.9778 672.7364




  GWAS USING LINEAR MIXED MODELS