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Project measure / variable:   Richfield1   horiz_aver

ID, description, units MPD:14510   horiz_aver   number of horizontal beam breaks, 45 min test   [n]  daily avg  
Data set, strains Richfield1   inbred   15 strains     sex: m     age: 7-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Richfield1 - number of horizontal beam breaks, 45 min test daily avg



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means5602   n
Median of the strain means4726   n
SD of the strain means± 3113
Coefficient of variation (CV)0.556
Min–max range of strain means1851   –   12024   n
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 1726281678.4102 123305834.1722 51.6779 < 0.0001
Residuals 144 343590916.7722 2386048.0331


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 1851.0 787.0   10 249.0 0.425 744.0, 3255.0 -1.21
A/HeJ m 4224.0 1205.0   10 381.0 0.285 2670.0, 6225.0 -0.44
A/J m 2772.0 978.0   10 309.0 0.353 1730.0, 4949.0 -0.91
AKR/J m 7437.0 1654.0   10 523.0 0.222 4043.0, 9848.0 0.59
B10.D2-Hc0 m 11253.0 1289.0   10 408.0 0.115 9451.0, 13346.0 1.82
BALB/cByJ m 7178.0 3121.0   10 987.0 0.435 4345.0, 14579.0 0.51
BALB/cJ m 4155.0 1717.0   10 543.0 0.413 1520.0, 6751.0 -0.46
C3H/HeJ m 4726.0 1036.0   10 328.0 0.219 2484.0, 5573.0 -0.28
C57BL/6J m 12024.0 1724.0   20 385.0 0.143 8588.0, 14959.0 2.06
CAST/EiJ m 7945.0 1409.0   10 446.0 0.177 5812.0, 9816.0 0.75
DBA/2J m 3924.0 966.0   10 305.0 0.246 2262.0, 5836.0 -0.54
MRL/MpJ m 6568.0 2323.0   10 735.0 0.354 3694.0, 10747.0 0.31
NZB/BlNJ m 3014.0 983.0   10 311.0 0.326 1432.0, 4820.0 -0.83
NZW/LacJ m 5031.0 977.0   10 309.0 0.194 3619.0, 7429.0 -0.18
SPRET/EiJ m 1927.0 740.0   9 247.0 0.384 1170.0, 3535.0 -1.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 1851.2 488.4719 2816.7014 885.6986
A/HeJ m 4224.2 488.4719 5189.7014 3258.6986
A/J m 2771.6 488.4719 3737.1014 1806.0986
AKR/J m 7437.2 488.4719 8402.7014 6471.6986
B10.D2-Hc0 m 11252.9 488.4719 12218.4014 10287.3986
BALB/cByJ m 7178.4 488.4719 8143.9014 6212.8986
BALB/cJ m 4155.3 488.4719 5120.8014 3189.7986
C3H/HeJ m 4725.5 488.4719 5691.0014 3759.9986
C57BL/6J m 12023.75 345.4018 12706.4626 11341.0374
CAST/EiJ m 7944.8 488.4719 8910.3014 6979.2986
DBA/2J m 3923.8 488.4719 4889.3014 2958.2986
MRL/MpJ m 6568.4 488.4719 7533.9014 5602.8986
NZB/BlNJ m 3013.5 488.4719 3979.0014 2047.9986
NZW/LacJ m 5031.2 488.4719 5996.7014 4065.6986
SPRET/EiJ m 1926.5556 514.8946 2944.2834 908.8277




  GWAS USING LINEAR MIXED MODELS