Project measure / variable:   Project1195   lightdark_vertical_episode_ct__centroid__tot_

ID, description, units MPD:130251   lightdark_vertical_episode_ct__centroid__tot_   lightdark_vertical_episode_ct__centroid__tot_    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - lightdark_vertical_episode_ct__centroid__tot_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means36.816   None 34.636   None
Median of the strain means38.284   None 33.046   None
SD of the strain means± 8.7373 ± 9.4445
Coefficient of variation (CV)0.2373 0.2727
Min–max range of strain means18.952   –   49.95   None 22.3   –   51.47   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10.8788 10.8788 0.063 0.8021
strain 9 17944.9071 1993.8786 11.5434 < 0.0001
sex:strain 9 1521.8102 169.09 0.9789 0.4587
Residuals 194 33509.5058 172.7294


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 18.952 10.225   21 2.2312 0.5395 3.5, 48.0 -2.04
C57BL/6J m 22.977 8.0526   22 1.7168 0.3505 12.5, 41.0 -1.23
GAIA/NachJ f 49.95 5.7805   10 1.8279 0.1157 38.5, 59.5 1.5
GAIA/NachJ m 51.47 6.2663   15 1.618 0.1218 41.0, 64.5 1.78
GAIC/NachJ f 39.667 8.3865   3 4.8419 0.2114 30.0, 45.0 0.33
GAIC/NachJ m 44.75 13.081   2   9.25 0.2923 35.5, 54.0 1.07
MANB/NachJ f 44.227 41.174   11 12.414 0.931 13.5, 166.0 0.85
MANB/NachJ m 33.3 6.9889   10 2.2101 0.2099 22.0, 43.5 -0.14
MANE/NachJ f 36.9 5.1039   5 2.2825 0.1383 29.0, 41.0 0.01
MANE/NachJ m 29.3 17.185   5 7.6854 0.5865 8.5, 48.5 -0.56
MANF/NachJ f 34.763 6.1663   20 1.3788 0.1774 22.5, 47.5 -0.23
MANF/NachJ m 32.792 7.8869   12 2.2767 0.2405 20.5, 47.0 -0.2
SARA/NachJ f 28.0 12.891   4 6.4453 0.4604 10.0, 40.5 -1.01
SARA/NachJ m 22.3 9.6385   10 3.048 0.4322 8.5, 34.5 -1.31
SARB/NachJ f 41.571 15.918   7 6.0163 0.3829 20.0, 67.5 0.54
SARB/NachJ m 42.409 4.652   11 1.4026 0.1097 33.0, 49.0 0.82
SARC/NachJ f 33.342 11.094   19 2.5452 0.3327 15.5, 49.0 -0.4
SARC/NachJ m 37.559 12.273   17 2.9766 0.3268 7.0, 60.0 0.31
TUCB/NachJ f 40.786 10.214   7 3.8604 0.2504 27.0, 54.0 0.45
TUCB/NachJ m 29.5 15.612   3 9.0139 0.5292 12.0, 42.0 -0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 44.2272727273 3.9626599357 52.0426982612 36.4118471933
129S1/SvImJ 2 33.3 4.1560728029 41.4968874522 25.1031125478
A/J 1 36.9 5.8775745241 48.4921494042 25.3078505958
A/J 2 29.3 5.8775745241 40.8921494042 17.7078505958
BALB/cJ 1 34.7625 2.938787262 40.5585747021 28.9664252979
BALB/cJ 2 32.7916666667 3.7939580413 40.2743669315 25.3089664018
BTBR T+ Itpr3tf/J 1 49.95 4.1560728029 58.1468874522 41.7531125478
BTBR T+ Itpr3tf/J 2 51.4666666667 3.3934192337 58.1593972456 44.7739360877
C3H/HeJ 1 28.0 6.5713280893 40.9604170365 15.0395829635
C3H/HeJ 2 22.3 4.1560728029 30.4968874522 14.1031125478
C57BL/6J 1 40.7857142857 4.9674571165 50.5828686761 30.9885598953
C57BL/6J 2 29.5 7.5879160826 44.4654005297 14.5345994703
CAST/EiJ 1 39.6666666667 7.5879160826 54.6320671964 24.701266137
CAST/EiJ 2 44.75 9.2932613067 63.0787975471 26.4212024529
DBA/2J 1 41.5714285714 4.9674571165 51.3685829618 31.774274181
DBA/2J 2 42.4090909091 3.9626599357 50.224516443 34.5936653751
FVB/NJ 1 33.3421052632 3.0151321122 39.2887524346 27.3954580918
FVB/NJ 2 37.5588235294 3.1875623309 43.8455492228 31.272097836
LP/J 1 18.9523809524 2.8679627034 24.608770677 13.2959912278
LP/J 2 22.9772727273 2.8020237121 28.5036131202 17.4509323344


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 38.7636363636 2.8712199023 44.4264501558 33.1008225714
A/J both 33.1 4.1560728029 41.2968874522 24.9031125478
BALB/cJ both 33.7770833333 2.3995097515 38.5095585104 29.0446081563
BTBR T+ Itpr3tf/J both 50.7083333333 2.6827334585 55.9994014322 45.4172652345
C3H/HeJ both 25.15 3.8876501257 32.817486121 17.482513879
C57BL/6J both 35.1428571429 4.5346471936 44.0863945745 26.1993197112
CAST/EiJ both 42.2083333333 5.9987743788 54.039521276 30.3771453907
DBA/2J both 41.9902597403 3.1771962471 48.2565407431 35.7239787374
FVB/NJ both 35.4504643963 2.1938308542 39.777285762 31.1236430305
LP/J both 20.9648268398 2.004778476 24.9187863381 17.0108673416




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA