Project measure / variable:   Project1195   lightdark_vertical_actv_time__centroid__tot__s

ID, description, units MPD:130250   lightdark_vertical_actv_time__centroid__tot__s   lightdark_vertical_actv_time__centroid__tot__s    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - lightdark_vertical_actv_time__centroid__tot__s



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means21.838   None 21.137   None
Median of the strain means21.335   None 18.392   None
SD of the strain means± 7.8785 ± 9.1331
Coefficient of variation (CV)0.3608 0.4321
Min–max range of strain means11.042   –   34.63   None 12.157   –   39.068   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0221 0.0221 0.0001 0.9934
strain 9 12906.9421 1434.1047 4.4025 < 0.0001
sex:strain 9 2315.6586 257.2954 0.7899 0.626
Residuals 194 63195.6514 325.7508


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 11.042 14.673   21 3.2019 1.3289 0.3, 69.16 -1.37
C57BL/6J m 12.157 5.2906   22 1.128 0.4352 3.485, 21.03 -0.98
GAIA/NachJ f 33.072 7.1648   10 2.2657 0.2166 25.24, 49.965 1.43
GAIA/NachJ m 39.068 10.504   15 2.712 0.2689 22.97, 60.4 1.96
GAIC/NachJ f 22.325 11.031   3 6.3686 0.4941 10.505, 32.345 0.06
GAIC/NachJ m 31.517 5.922   2   4.1875 0.1879 27.33, 35.705 1.14
MANB/NachJ f 34.63 68.66   11 20.702 1.9827 9.3, 241.3 1.62
MANB/NachJ m 16.622 3.4139   10 1.0796 0.2054 11.295, 21.35 -0.49
MANE/NachJ f 16.572 6.2089   5 2.7767 0.3747 7.835, 25.215 -0.67
MANE/NachJ m 13.377 10.843   5 4.8493 0.8106 1.425, 25.635 -0.85
MANF/NachJ f 20.345 4.8343   20 1.081 0.2376 10.485, 27.77 -0.19
MANF/NachJ m 20.163 8.1762   12 2.3603 0.4055 9.365, 39.13 -0.11
SARA/NachJ f 12.742 7.2705   4 3.6353 0.5706 2.43, 17.875 -1.15
SARA/NachJ m 12.402 8.8305   10 2.7924 0.712 2.785, 29.58 -0.96
SARB/NachJ f 25.929 19.315   7 7.3004 0.7449 5.255, 61.46 0.52
SARB/NachJ m 28.805 4.5445   11 1.3702 0.1578 23.205, 36.99 0.84
SARC/NachJ f 17.647 8.5142   19 1.9533 0.4825 3.995, 30.39 -0.53
SARC/NachJ m 21.034 9.5347   17 2.3125 0.4533 1.285, 41.07 -0.01
TUCB/NachJ f 24.075 10.286   7 3.8879 0.4273 13.46, 44.345 0.28
TUCB/NachJ m 16.222 11.515   3 6.6483 0.7099 4.91, 27.93 -0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 34.6295454545 5.4418477844 45.362325157 23.8967657521
129S1/SvImJ 2 16.622 5.7074581067 27.8786343174 5.3653656826
A/J 1 16.572 8.0715646611 32.4912849183 0.6527150817
A/J 2 13.377 8.0715646611 29.2962849183 -2.5422849183
BALB/cJ 1 20.345 4.0357823306 28.3046424592 12.3853575408
BALB/cJ 2 20.1633333333 5.2101725851 30.439187562 9.8874791046
BTBR T+ Itpr3tf/J 1 33.072 5.7074581067 44.3286343174 21.8153656826
BTBR T+ Itpr3tf/J 2 39.0676666667 4.6601200299 48.2586700996 29.8766632338
C3H/HeJ 1 12.7425 9.0242836336 30.5408016153 -5.0558016153
C3H/HeJ 2 12.4025 5.7074581067 23.6591343174 1.1458656826
C57BL/6J 1 24.075 6.8217172157 37.5292513809 10.6207486191
C57BL/6J 2 16.2216666667 10.4203451701 36.773375124 -4.3300417907
CAST/EiJ 1 22.325 10.4203451701 42.8767084574 1.7732915426
CAST/EiJ 2 31.5175 12.7622643053 56.6880995315 6.3469004685
DBA/2J 1 25.9285714286 6.8217172157 39.3828228095 12.4743200476
DBA/2J 2 28.8054545455 5.4418477844 39.5382342479 18.072674843
FVB/NJ 1 17.6468421053 4.1406253049 25.8132629587 9.4804212518
FVB/NJ 2 21.0344117647 4.3774205431 29.6678561784 12.400967351
LP/J 1 11.0416666667 3.9385202708 18.8094823232 3.2738510101
LP/J 2 12.1575 3.8479674705 19.7467213086 4.5682786914


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.6257727273 3.942993322 33.4024104374 17.8491350172
A/J both 14.9745 5.7074581067 26.2311343174 3.7178656826
BALB/cJ both 20.2541666667 3.2952024743 26.75318752 13.7551458134
BTBR T+ Itpr3tf/J both 36.0698333333 3.6841483661 43.3359595409 28.8037071257
C3H/HeJ both 12.5725 5.3388381961 23.102117236 2.042882764
C57BL/6J both 20.1483333333 6.2273473333 32.4303282928 7.8663383739
CAST/EiJ both 26.92125 8.2380061857 43.1688021333 10.6736978667
DBA/2J both 27.367012987 4.3631849915 35.9723810844 18.7616448897
FVB/NJ both 19.340626935 3.0127474391 25.282570893 13.398682977
LP/J both 11.5995833333 2.7531252958 17.0294829674 6.1696836993




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA