Project measure / variable:   Project1195   lightdark_stereotypic_episode_actv_ct__centroid__tot_

ID, description, units MPD:130243   lightdark_stereotypic_episode_actv_ct__centroid__tot_   lightdark_stereotypic_episode_actv_ct__centroid__tot_    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - lightdark_stereotypic_episode_actv_ct__centroid__tot_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means822.5   None 738.7   None
Median of the strain means823.3   None 666.0   None
SD of the strain means± 201.5 ± 171.1
Coefficient of variation (CV)0.245 0.2316
Min–max range of strain means549.1   –   1199.0   None 568.3   –   1016.0   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 17847.1425 17847.1425 0.6061 0.4372
strain 9 5860430.0162 651158.8907 22.1139 < 0.0001
sex:strain 9 285456.9827 31717.4425 1.0771 0.3813
Residuals 194 5712474.5893 29445.7453


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 912.5 244.6   21 53.39 0.2681 515.5, 1296.0 0.45
C57BL/6J m 909.4 181.7   22 38.737 0.1998 565.0, 1209.0 1.0
GAIA/NachJ f 791.0 151.7   10 47.983 0.1918 586.0, 979.5 -0.16
GAIA/NachJ m 685.1 108.3   15 27.952 0.158 459.0, 851.5 -0.31
GAIC/NachJ f 756.7 157.8   3 91.11 0.2085 590.5, 904.5 -0.33
GAIC/NachJ m 620.0 204.4   2   144.5 0.3296 475.5, 764.5 -0.69
MANB/NachJ f 549.1 122.8   11 37.019 0.2236 380.5, 753.5 -1.36
MANB/NachJ m 601.4 169.1   10 53.49 0.2813 369.0, 904.5 -0.8
MANE/NachJ f 1199.0 114.6   5 51.26 0.0956 1076.0, 1315.0 1.87
MANE/NachJ m 967.6 104.4   5 46.692 0.1079 863.0, 1088.0 1.34
MANF/NachJ f 586.6 155.8   20 34.829 0.2655 349.5, 900.0 -1.17
MANF/NachJ m 568.3 85.0   12 24.538 0.1496 420.5, 694.0 -1.0
SARA/NachJ f 1007.0 148.9   4 74.45 0.1479 799.5, 1154.0 0.92
SARA/NachJ m 1016.0 241.5   10 76.37 0.2377 804.5, 1592.0 1.62
SARB/NachJ f 928.3 281.9   7 106.6 0.3037 511.0, 1284.0 0.52
SARB/NachJ m 800.9 180.5   11 54.41 0.2253 565.5, 1071.0 0.36
SARC/NachJ f 639.6 134.2   19 30.781 0.2098 410.5, 889.0 -0.91
SARC/NachJ m 571.6 140.2   17 34.012 0.2453 250.5, 819.5 -0.98
TUCB/NachJ f 855.6 202.4   7 76.49 0.2365 625.5, 1166.0 0.16
TUCB/NachJ m 647.0 134.5   3 77.64 0.2078 506.5, 774.5 -0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 549.0909090909 51.7386309916 651.1333311759 447.0484870059
129S1/SvImJ 2 601.35 54.2639339762 708.3729951715 494.3270048285
A/J 1 1198.6 76.7407913769 1349.9533712573 1047.2466287427
A/J 2 967.6 76.7407913769 1118.9533712573 816.2466287427
BALB/cJ 1 586.64 38.3703956884 662.3166856286 510.9633143714
BALB/cJ 2 568.2916666667 49.5359678296 665.989847712 470.5934856214
BTBR T+ Itpr3tf/J 1 791.0 54.2639339762 898.0229951715 683.9770048285
BTBR T+ Itpr3tf/J 2 685.1 44.3063165593 772.4839096381 597.7160903619
C3H/HeJ 1 1006.625 85.7988130829 1175.8432133775 837.4067866225
C3H/HeJ 2 1015.8 54.2639339762 1122.8229951715 908.7770048285
C57BL/6J 1 855.5714285714 64.8578063434 983.488374257 727.6544828858
C57BL/6J 2 647.0 99.0719356591 842.3963620906 451.6036379094
CAST/EiJ 1 756.6666666667 99.0719356591 952.0630287572 561.2703045761
CAST/EiJ 2 620.0 121.3378450974 859.310692359 380.689307641
DBA/2J 1 928.2857142857 64.8578063434 1056.2026599713 800.3687686001
DBA/2J 2 800.8636363636 51.7386309916 902.9060584486 698.8212142786
FVB/NJ 1 639.5526315789 39.3671953373 717.1952727915 561.9099903664
FVB/NJ 2 571.5882352941 41.6185375169 653.6711255922 489.505344996
LP/J 1 912.5476190476 37.4456719514 986.4005020731 838.6947360221
LP/J 2 909.4090909091 36.5847368235 981.5639795341 837.2542022841


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 575.2204545455 37.4881997016 649.1572136718 501.2836954191
A/J both 1083.1 54.2639339762 1190.1229951715 976.0770048285
BALB/cJ both 577.4658333333 31.3292968885 639.2555884051 515.6760782616
BTBR T+ Itpr3tf/J both 738.05 35.0272187649 807.1330463267 668.9669536733
C3H/HeJ both 1011.2125 50.7592623494 1111.3233451095 911.1016548905
C57BL/6J both 751.2857142857 59.206805941 868.057375351 634.5140532205
CAST/EiJ both 688.3333333333 78.3232422211 842.8077210126 533.858945654
DBA/2J both 864.5746753247 41.483192321 946.3906286872 782.7587219621
FVB/NJ both 605.5704334365 28.6438419812 662.0637529844 549.0771138887
LP/J both 910.9783549784 26.175471898 962.6033883528 859.3533216039




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA