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Project measure / variable:   Project1195   nmr_fat_mass__19wks__g

ID, description, units MPD:130134   nmr_fat_mass__19wks__g   nmr_fat_mass__19wks__g    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - nmr_fat_mass__19wks__g



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means1.341   None 2.0609   None
Median of the strain means1.2825   None 1.2559   None
SD of the strain means± 0.49924 ± 1.6779
Coefficient of variation (CV)0.3723 0.8141
Min–max range of strain means0.77   –   2.2375   None 0.602   –   4.9573   None
Mean sample size per strain9.4   mice 9.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 46.0881 46.0881 60.6892 < 0.0001
strain 8 224.1459 28.0182 36.8947 < 0.0001
sex:strain 8 81.6746 10.2093 13.4437 < 0.0001
Residuals 164 124.5434 0.7594


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 1.9311 0.41681   18 0.09824 0.2158 0.88, 2.58 1.18
C57BL/6J m 4.9573 1.7453   15 0.45064 0.3521 2.14, 7.11 1.73
GAIA/NachJ f 0.77 0.17114   10 0.05412 0.2223 0.46, 1.05 -1.14
GAIA/NachJ m 0.85133 0.31543   15 0.08144 0.3705 0.29, 1.39 -0.72
GAIC/NachJ f 1.245 0.41719   2   0.295 0.3351 0.95, 1.54 -0.19
GAIC/NachJ m 1.6 0.0   1   0.0 0.0 1.6, 1.6 -0.27
MANB/NachJ f 0.904 0.26345   10 0.08331 0.2914 0.66, 1.59 -0.88
MANB/NachJ m 0.96 0.29555   9 0.09852 0.3079 0.45, 1.49 -0.66
MANE/NachJ f 1.588 0.51232   5 0.22912 0.3226 1.01, 2.41 0.49
MANE/NachJ m 1.5517 0.59355   6 0.24231 0.3825 0.62, 2.09 -0.3
MANF/NachJ f 0.82333 0.30787   15 0.07949 0.3739 0.3, 1.28 -1.04
MANF/NachJ m 0.602 0.57748   10 0.18262 0.9593 0.09, 1.96 -0.87
SARA/NachJ f 2.2375 0.47738   4 0.23869 0.2134 1.82, 2.92 1.8
SARA/NachJ m 4.517 1.1648   10 0.36833 0.2579 2.52, 6.59 1.46
SARB/NachJ f 1.32 0.34616   8 0.12239 0.2622 0.8, 1.87 -0.04
SARB/NachJ m 3.7733 2.445   9 0.81499 0.648 1.76, 9.48 1.02
SARC/NachJ f 0.95533 0.19606   15 0.05062 0.2052 0.54, 1.21 -0.77
SARC/NachJ m 0.95 0.46016   13 0.12763 0.4844 0.54, 2.12 -0.66
TUCB/NachJ f 1.6357 0.79019   7 0.29866 0.4831 0.71, 3.13 0.59
TUCB/NachJ m 0.84667 0.47057   3 0.27168 0.5558 0.49, 1.38 -0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 1.588 0.3897207217 2.3575170399 0.8184829601
129S1/SvImJ 2 1.5516666667 0.3557647173 2.2541364019 0.8491969315
A/J 1 0.8233333333 0.2250053636 1.2676142035 0.3790524632
A/J 2 0.602 0.2755741651 1.1461307171 0.0578692829
BALB/cJ 1 2.2375 0.435721013 3.0978462055 1.3771537945
BALB/cJ 2 4.517 0.2755741651 5.0611307171 3.9728692829
BTBR T+ Itpr3tf/J 1 0.77 0.2755741651 1.3141307171 0.2258692829
BTBR T+ Itpr3tf/J 2 0.8513333333 0.2250053636 1.2956142035 0.4070524632
C3H/HeJ 1 1.6357142857 0.3293741261 2.286074886 0.9853536854
C3H/HeJ 2 0.8466666667 0.5031272882 1.8401088934 -0.14677556
C57BL/6J 1 1.32 0.308101283 1.9283566361 0.7116433639
C57BL/6J 2 3.7733333333 0.2904806753 4.3468974703 3.1997691963
CAST/EiJ 1 0.904 0.2755741651 1.4481307171 0.3598692829
CAST/EiJ 2 0.96 0.2904806753 1.533564137 0.386435863
DBA/2J 1 0.9553333333 0.2250053636 1.3996142035 0.5110524632
DBA/2J 2 0.95 0.2416945314 1.427234209 0.472765791
FVB/NJ 1 1.9311111111 0.2054008553 2.3366822018 1.5255400204
FVB/NJ 2 4.9573333333 0.2250053636 5.4016142035 4.5130524632


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.5698333333 0.2638421758 2.0907988321 1.0488678346
A/J both 0.7126666667 0.1778823587 1.0639015343 0.3614317991
BALB/cJ both 3.37725 0.2577760276 3.8862376793 2.8682623207
BTBR T+ Itpr3tf/J both 0.8106666667 0.1778823587 1.1619015343 0.4594317991
C3H/HeJ both 1.2411904762 0.3006760645 1.8348857617 0.6474951907
C57BL/6J both 2.5466666667 0.2117223555 2.9647197781 2.1286135552
CAST/EiJ both 0.932 0.2001999895 1.3273018013 0.5366981987
DBA/2J both 0.9526666667 0.1651087976 1.2786796962 0.6266536371
FVB/NJ both 3.4442222222 0.1523293512 3.7450017932 3.1434426513




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA