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Project measure / variable:   Project1195   nmr_fat_mass__16wks__g

ID, description, units MPD:130128   nmr_fat_mass__16wks__g   nmr_fat_mass__16wks__g    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - nmr_fat_mass__16wks__g



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means1.3898   None 2.008   None
Median of the strain means1.1285   None 1.4442   None
SD of the strain means± 0.86871 ± 1.5264
Coefficient of variation (CV)0.625 0.7602
Min–max range of strain means0.558   –   3.39   None 0.52833   –   4.628   None
Mean sample size per strain10.4   mice 9.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 42.9645 42.9645 80.1064 < 0.0001
strain 9 255.7062 28.4118 52.9732 < 0.0001
sex:strain 9 40.0372 4.4486 8.2943 < 0.0001
Residuals 181 97.078 0.5363


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 1.8216 0.41044   19 0.09416 0.2253 1.0, 2.58 0.5
C57BL/6J m 3.9865 1.5083   17 0.36582 0.3784 1.45, 7.1 1.3
GAIA/NachJ f 0.558 0.12063   10 0.03815 0.2162 0.38, 0.72 -0.96
GAIA/NachJ m 0.842 0.43163   15 0.11145 0.5126 0.29, 1.87 -0.76
GAIC/NachJ f 1.095 0.03536   2   0.025 0.0323 1.07, 1.12 -0.34
GAIC/NachJ m 1.455 0.0495   2   0.035 0.034 1.42, 1.49 -0.36
MANB/NachJ f 1.0 0.32894   10 0.10402 0.3289 0.67, 1.51 -0.45
MANB/NachJ m 1.4333 0.55163   9 0.18388 0.3849 0.85, 2.56 -0.38
MANE/NachJ f 1.162 0.57851   5 0.25872 0.4979 0.51, 2.05 -0.26
MANE/NachJ m 1.465 0.63959   6 0.26111 0.4366 0.52, 2.13 -0.36
MANF/NachJ f 0.5865 0.39427   20 0.08816 0.6722 0.14, 1.76 -0.92
MANF/NachJ m 0.52833 0.56697   12 0.16367 1.0731 -0.97
SARA/NachJ f 3.39 0.82308   4 0.41154 0.2428 2.5, 4.44 2.3
SARA/NachJ m 4.628 0.93272   10 0.29495 0.2015 3.2, 6.26 1.72
SARB/NachJ f 1.8638 0.37943   8 0.13415 0.2036 1.26, 2.35 0.55
SARB/NachJ m 3.8144 1.7028   9 0.56759 0.4464 1.67, 6.82 1.18
SARC/NachJ f 0.62421 0.17443   19 0.04002 0.2794 0.33, 1.08 -0.88
SARC/NachJ m 0.59786 0.27957   14 0.07472 0.4676 0.32, 1.26 -0.92
TUCB/NachJ f 1.7971 0.9504   7 0.35922 0.5288 0.45, 2.98 0.47
TUCB/NachJ m 1.33 0.53507   3 0.30892 0.4023 0.8, 1.87 -0.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 1.0 0.2315907087 1.4569648377 0.5430351623
129S1/SvImJ 2 1.4333333333 0.2441180415 1.9150165659 0.9516501007
A/J 1 1.162 0.3275187211 1.808245871 0.515754129
A/J 2 1.465 0.2989823193 2.0549390688 0.8750609312
BALB/cJ 1 0.5865 0.1637593606 0.9096229355 0.2633770645
BALB/cJ 2 0.5283333333 0.2114124254 0.9454832493 0.1111834173
BTBR T+ Itpr3tf/J 1 0.558 0.2315907087 1.0149648377 0.1010351623
BTBR T+ Itpr3tf/J 2 0.842 0.1890930218 1.2151102276 0.4688897724
C3H/HeJ 1 3.39 0.3661770622 4.1125248489 2.6674751511
C3H/HeJ 2 4.628 0.2315907087 5.0849648377 4.1710351623
C57BL/6J 1 1.7971428571 0.2768038407 2.3433203047 1.2509654096
C57BL/6J 2 1.33 0.4228248508 2.164299832 0.495700168
CAST/EiJ 1 1.095 0.5178525676 2.1168044405 0.0731955595
CAST/EiJ 2 1.455 0.5178525676 2.4768044405 0.4331955595
DBA/2J 1 1.86375 0.2589262838 2.3746522202 1.3528477798
DBA/2J 2 3.8144444444 0.2441180415 4.2961276771 3.3327612118
FVB/NJ 1 0.6242105263 0.1680135589 0.9557276632 0.2926933894
FVB/NJ 2 0.5978571429 0.1957298728 0.9840629197 0.211651366
LP/J 1 1.8215789474 0.1680135589 2.1530960843 1.4900618105
LP/J 2 3.9864705882 0.1776219653 4.3369466199 3.6359945566


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.2166666667 0.1682467492 1.5486439247 0.8846894086
A/J both 1.3135 0.2217312224 1.7510105229 0.8759894771
BALB/cJ both 0.5574166667 0.133708958 0.8212454387 0.2935878946
BTBR T+ Itpr3tf/J both 0.7 0.1494911596 0.9949695344 0.4050304656
C3H/HeJ both 4.009 0.2166332715 4.4364514651 3.5815485349
C57BL/6J both 1.5635714286 0.2526861792 2.0621609426 1.0649819146
CAST/EiJ both 1.275 0.3661770622 1.9975248489 0.5524751511
DBA/2J both 2.8390972222 0.1779300695 3.190181192 2.4880132525
FVB/NJ both 0.6110338346 0.12897552 0.8655227902 0.356544879
LP/J both 2.9040247678 0.1222478206 3.1452389158 2.6628106198




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA