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Project measure / variable:   Project1195   nmr_fat_mass__12wks__g

ID, description, units MPD:130122   nmr_fat_mass__12wks__g   nmr_fat_mass__12wks__g    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - nmr_fat_mass__12wks__g



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means1.2768   None 2.2207   None
Median of the strain means1.0402   None 1.3984   None
SD of the strain means± 0.59797 ± 1.7226
Coefficient of variation (CV)0.4683 0.7757
Min–max range of strain means0.612   –   2.4126   None 0.6725   –   4.925   None
Mean sample size per strain10.5   mice 10.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 61.1872 61.1872 76.601 < 0.0001
strain 9 284.576 31.6196 39.5849 < 0.0001
sex:strain 9 55.9145 6.2127 7.7778 < 0.0001
Residuals 187 149.3716 0.7988


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 2.4126 0.59656   19 0.13686 0.2473 1.43, 3.67 1.9
C57BL/6J m 4.2806 1.529   17 0.37084 0.3572 1.95, 6.66 1.2
GAIA/NachJ f 0.612 0.40428   10 0.12784 0.6606 0.15, 1.66 -1.11
GAIA/NachJ m 1.022 0.95428   15 0.24639 0.9337 0.39, 4.05 -0.7
GAIC/NachJ f 1.055 0.2192   2   0.155 0.2078 0.9, 1.21 -0.37
GAIC/NachJ m 1.985 0.84146   2   0.595 0.4239 1.39, 2.58 -0.14
MANB/NachJ f 1.0255 0.32479   11 0.09793 0.3167 0.61, 1.67 -0.42
MANB/NachJ m 1.701 0.71808   10 0.22708 0.4221 0.82, 2.69 -0.3
MANE/NachJ f 1.188 0.45135   5 0.20185 0.3799 0.73, 1.81 -0.15
MANE/NachJ m 0.85833 0.34278   6 0.13994 0.3994 0.44, 1.39 -0.79
MANF/NachJ f 0.794 0.44732   20 0.10002 0.5634 0.33, 1.94 -0.81
MANF/NachJ m 0.6725 0.57862   12 0.16703 0.8604 0.18, 2.29 -0.9
SARA/NachJ f 1.915 0.51701   4 0.25851 0.27 1.28, 2.42 1.07
SARA/NachJ m 4.925 1.4483   10 0.45801 0.2941 2.05, 7.03 1.57
SARB/NachJ f 1.9438 0.67301   8 0.23794 0.3462 1.22, 3.05 1.12
SARB/NachJ m 4.72 2.2616   10 0.71518 0.4791 1.32, 8.44 1.45
SARC/NachJ f 0.83053 0.16284   19 0.03736 0.1961 0.57, 1.19 -0.75
SARC/NachJ m 1.0959 0.60709   17 0.14724 0.554 0.31, 2.32 -0.65
TUCB/NachJ f 0.99143 0.27193   7 0.10278 0.2743 0.6, 1.42 -0.48
TUCB/NachJ m 0.94667 0.38553   3 0.22259 0.4072 0.51, 1.24 -0.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 1.0254545455 0.269473992 1.5570542522 0.4938548387
129S1/SvImJ 2 1.701 0.2826267072 2.2585464761 1.1434535239
A/J 1 1.188 0.3996945224 1.9764897882 0.3995102118
A/J 2 0.8583333333 0.36486951 1.5781227389 0.1385439278
BALB/cJ 1 0.794 0.1998472612 1.1882448941 0.3997551059
BALB/cJ 2 0.6725 0.2580017048 1.1814679697 0.1635320303
BTBR T+ Itpr3tf/J 1 0.612 0.2826267072 1.1695464761 0.0544535239
BTBR T+ Itpr3tf/J 2 1.022 0.2307637401 1.4772347914 0.5667652086
C3H/HeJ 1 1.915 0.4468720611 2.7965583829 1.0334416171
C3H/HeJ 2 4.925 0.2826267072 5.4825464761 4.3674535239
C57BL/6J 1 0.9914285714 0.3378035262 1.6578240707 0.3250330722
C57BL/6J 2 0.9466666667 0.5160034096 1.9646026061 -0.0712692727
CAST/EiJ 1 1.055 0.6319725295 2.3017118212 -0.1917118212
CAST/EiJ 2 1.985 0.6319725295 3.2317118212 0.7382881788
DBA/2J 1 1.94375 0.3159862647 2.5671059106 1.3203940894
DBA/2J 2 4.72 0.2826267072 5.2775464761 4.1624535239
FVB/NJ 1 0.8305263158 0.2050389637 1.2350130425 0.426039589
FVB/NJ 2 1.0958823529 0.2167647893 1.5235009798 0.6682637261
LP/J 1 2.4126315789 0.2050389637 2.8171183057 2.0081448522
LP/J 2 4.2805882353 0.2167647893 4.7082068621 3.8529696085


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.3632272727 0.1952524571 1.7484078541 0.9780466913
A/J both 1.0231666667 0.2705944708 1.5569767767 0.4893565566
BALB/cJ both 0.73325 0.1631746055 1.0551496081 0.4113503919
BTBR T+ Itpr3tf/J both 0.817 0.182434755 1.1768947028 0.4571052972
C3H/HeJ both 3.42 0.2643730766 3.9415369727 2.8984630273
C57BL/6J both 0.969047619 0.3083710188 1.5773806977 0.3607145404
CAST/EiJ both 1.52 0.4468720611 2.4015583829 0.6384416171
DBA/2J both 3.331875 0.2119700304 3.7500348571 2.9137151429
FVB/NJ both 0.9632043344 0.1491877597 1.2575116576 0.6688970111
LP/J both 3.3466099071 0.1491877597 3.6409172304 3.0523025839




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA