Project measure / variable:   Project1195   nmr_lean_mass__12wks__g

ID, description, units MPD:130120   nmr_lean_mass__12wks__g   nmr_lean_mass__12wks__g    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - nmr_lean_mass__12wks__g



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means13.363   None 17.027   None
Median of the strain means12.87   None 16.071   None
SD of the strain means± 2.3074 ± 2.9315
Coefficient of variation (CV)0.1727 0.1722
Min–max range of strain means10.866   –   17.928   None 14.407   –   23.559   None
Mean sample size per strain10.5   mice 10.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 775.7378 775.7378 516.9607 < 0.0001
strain 9 1611.133 179.0148 119.2975 < 0.0001
sex:strain 9 61.4195 6.8244 4.5479 < 0.0001
Residuals 187 280.6073 1.5006


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 17.928 0.97955   19 0.22472 0.0546 15.65, 19.47 1.98
C57BL/6J m 23.559 1.3719   17 0.33273 0.0582 21.45, 25.59 2.23
GAIA/NachJ f 13.729 0.94493   10 0.29881 0.0688 11.65, 15.09 0.16
GAIA/NachJ m 17.21 1.4146   15 0.36526 0.0822 14.73, 18.76 0.06
GAIC/NachJ f 11.69 0.82024   2   0.58 0.0702 11.11, 12.27 -0.72
GAIC/NachJ m 16.025 0.47376   2   0.335 0.0296 15.69, 16.36 -0.34
MANB/NachJ f 11.77 0.51913   11 0.15652 0.0441 10.76, 12.51 -0.69
MANB/NachJ m 14.745 1.4851   10 0.46963 0.1007 12.29, 16.96 -0.78
MANE/NachJ f 11.414 0.26054   5 0.11652 0.0228 11.01, 11.68 -0.84
MANE/NachJ m 14.407 0.74912   6 0.30583 0.052 13.55, 15.61 -0.89
MANF/NachJ f 10.866 1.066   20 0.23837 0.0981 8.9, 12.93 -1.08
MANF/NachJ m 14.41 1.8137   12 0.52356 0.1259 11.76, 16.79 -0.89
SARA/NachJ f 13.31 0.29178   4 0.14589 0.0219 13.03, 13.72 -0.02
SARA/NachJ m 17.181 1.8431   10 0.58283 0.1073 14.18, 19.49 0.05
SARB/NachJ f 16.591 0.60194   8 0.21282 0.0363 15.59, 17.31 1.4
SARB/NachJ m 20.609 1.7478   10 0.55272 0.0848 18.4, 24.06 1.22
SARC/NachJ f 13.896 0.49564   19 0.11371 0.0357 12.82, 14.66 0.23
SARC/NachJ m 16.01 1.5991   17 0.38784 0.0999 13.02, 18.18 -0.35
TUCB/NachJ f 12.431 0.94526   7 0.35727 0.076 11.03, 13.56 -0.4
TUCB/NachJ m 16.117 0.81279   3 0.46927 0.0504 15.21, 16.78 -0.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 11.77 0.3693451168 12.4986185739 11.0413814261
129S1/SvImJ 2 14.745 0.3873724265 15.5091816073 13.9808183927
A/J 1 11.414 0.5478273393 12.4947159931 10.3332840069
A/J 2 14.4066666667 0.5000956522 15.3932208795 13.4201124538
BALB/cJ 1 10.866 0.2739136696 11.4063579966 10.3256420034
BALB/cJ 2 14.41 0.3536210269 15.1075991739 13.7124008261
BTBR T+ Itpr3tf/J 1 13.729 0.3873724265 14.4931816073 12.9648183927
BTBR T+ Itpr3tf/J 2 17.21 0.3162882618 17.8339516696 16.5860483304
C3H/HeJ 1 13.31 0.6124895853 14.5182772125 12.1017227875
C3H/HeJ 2 17.181 0.3873724265 17.9451816073 16.4168183927
C57BL/6J 1 12.4314285714 0.4629986066 13.3448002912 11.5180568517
C57BL/6J 2 16.1166666667 0.7072420539 17.5118650145 14.7214683189
CAST/EiJ 1 11.69 0.8661910783 13.398762021 9.981237979
CAST/EiJ 2 16.025 0.8661910783 17.733762021 14.316237979
DBA/2J 1 16.59125 0.4330955392 17.4456310105 15.7368689895
DBA/2J 2 20.609 0.3873724265 21.3731816073 19.8448183927
FVB/NJ 1 13.8963157895 0.2810294954 14.4507113963 13.3419201826
FVB/NJ 2 16.01 0.2971010888 16.5961005379 15.4238994621
LP/J 1 17.9284210526 0.2810294954 18.4828166595 17.3740254458
LP/J 2 23.5594117647 0.2971010888 24.1455123026 22.9733112268


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 13.2575 0.2676159618 13.785434313 12.729565687
A/J both 12.9103333333 0.3708808619 13.6419815194 12.1786851473
BALB/cJ both 12.638 0.2236495747 13.0792004567 12.1967995433
BTBR T+ Itpr3tf/J both 15.4695 0.2500478261 15.9627771064 14.9762228936
C3H/HeJ both 15.2455 0.3623537253 15.9603264389 14.5306735611
C57BL/6J both 14.274047619 0.4226579683 15.1078381095 13.4402571286
CAST/EiJ both 13.8575 0.6124895853 15.0657772125 12.6492227875
DBA/2J both 18.600125 0.2905293199 19.1732612055 18.0269887945
FVB/NJ both 14.9531578947 0.204478993 15.3565399498 14.5497758397
LP/J both 20.7439164087 0.204478993 21.1472984637 20.3405343536




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA