Project measure / variable:   Project1195   nmr_fat_mass__8wks__g

ID, description, units MPD:130116   nmr_fat_mass__8wks__g   nmr_fat_mass__8wks__g    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - nmr_fat_mass__8wks__g



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means1.5447   None 1.9291   None
Median of the strain means1.4387   None 1.1042   None
SD of the strain means± 0.65131 ± 1.5884
Coefficient of variation (CV)0.4217 0.8234
Min–max range of strain means0.6185   –   2.53   None 0.79176   –   5.324   None
Mean sample size per strain10.7   mice 10.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 16.3226 16.3226 42.0791 < 0.0001
strain 9 245.5217 27.2802 70.3275 < 0.0001
sex:strain 9 34.1372 3.793 9.7783 < 0.0001
Residuals 192 74.4772 0.3879


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 1.9642 0.45345   19 0.10403 0.2309 1.22, 2.98 0.64
C57BL/6J m 2.2571 0.59133   17 0.14342 0.262 1.24, 3.74 0.21
GAIA/NachJ f 0.904 0.48268   10 0.15264 0.5339 0.23, 1.81 -0.98
GAIA/NachJ m 0.95 0.50934   15 0.13151 0.5361 0.38, 2.17 -0.62
GAIC/NachJ f 1.7433 0.41102   3 0.2373 0.2358 1.27, 2.01 0.3
GAIC/NachJ m 1.79 0.69296   2   0.49 0.3871 1.3, 2.28 -0.09
MANB/NachJ f 1.2055 0.18651   11 0.05624 0.1547 0.93, 1.48 -0.52
MANB/NachJ m 1.225 0.51638   10 0.16329 0.4215 0.44, 1.99 -0.44
MANE/NachJ f 1.672 0.47521   5 0.21252 0.2842 0.89, 2.07 0.2
MANE/NachJ m 0.91333 0.29991   6 0.12244 0.3284 0.6, 1.45 -0.64
MANF/NachJ f 1.1025 0.64435   20 0.14408 0.5844 0.28, 2.68 -0.68
MANF/NachJ m 0.84571 0.39481   14 0.10552 0.4668 0.46, 1.7 -0.68
SARA/NachJ f 2.53 0.7645   4 0.38225 0.3022 1.48, 3.21 1.51
SARA/NachJ m 5.324 1.5516   10 0.49067 0.2914 1.98, 7.69 2.14
SARB/NachJ f 2.5037 0.88895   8 0.31429 0.355 1.2, 3.56 1.47
SARB/NachJ m 4.2109 1.0977   11 0.33096 0.2607 2.78, 6.24 1.44
SARC/NachJ f 0.6185 0.1872   20 0.04186 0.3027 0.24, 0.95 -1.42
SARC/NachJ m 0.79176 0.34913   17 0.08468 0.4409 0.4, 1.52 -0.72
TUCB/NachJ f 1.2029 0.36805   7 0.13911 0.306 0.87, 1.96 -0.52
TUCB/NachJ m 0.98333 0.30665   3 0.17704 0.3118 0.63, 1.18 -0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 1.2054545455 0.187786658 1.5758442908 0.8350648001
129S1/SvImJ 2 1.225 0.1969523085 1.6134680422 0.8365319578
A/J 1 1.672 0.2785326258 2.2213767738 1.1226232262
A/J 2 0.9133333333 0.2542643369 1.4148434193 0.4118232474
BALB/cJ 1 1.1025 0.1392663129 1.3771883869 0.8278116131
BALB/cJ 2 0.8457142857 0.1664550815 1.1740297044 0.517398867
BTBR T+ Itpr3tf/J 1 0.904 0.1969523085 1.2924680422 0.5155319578
BTBR T+ Itpr3tf/J 2 0.95 0.1608108865 1.2671828282 0.6328171718
C3H/HeJ 1 2.53 0.3114089426 3.1442219057 1.9157780943
C3H/HeJ 2 5.324 0.1969523085 5.7124680422 4.9355319578
C57BL/6J 1 1.2028571429 0.2354030338 1.6671652607 0.738549025
C57BL/6J 2 0.9833333333 0.3595840737 1.6925756986 0.2740909681
CAST/EiJ 1 1.7433333333 0.3595840737 2.4525756986 1.0340909681
CAST/EiJ 2 1.79 0.4403987501 2.6586409494 0.9213590506
DBA/2J 1 2.50375 0.220199375 2.9380704747 2.0694295253
DBA/2J 2 4.2109090909 0.187786658 4.5812988362 3.8405193456
FVB/NJ 1 0.6185 0.1392663129 0.8931883869 0.3438116131
FVB/NJ 2 0.7917647059 0.1510555251 1.0897060935 0.4938233182
LP/J 1 1.9642105263 0.1428842222 2.2460348648 1.6823861878
LP/J 2 2.2570588235 0.1510555251 2.5550002112 1.9591174359


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.2152272727 0.1360643604 1.4836001399 0.9468544056
A/J both 1.2926666667 0.1885674791 1.6645965007 0.9207368326
BALB/cJ both 0.9741071429 0.1085154368 1.1881426096 0.7600716762
BTBR T+ Itpr3tf/J both 0.927 0.1271321684 1.177755043 0.676244957
C3H/HeJ both 3.927 0.184232015 4.2903785799 3.5636214201
C57BL/6J both 1.0930952381 0.2148925862 1.516948621 0.6692418552
CAST/EiJ both 1.7666666667 0.2842761708 2.3273719885 1.2059613449
DBA/2J both 3.3573295455 0.144699338 3.642734012 3.0719250789
FVB/NJ both 0.7051323529 0.1027288635 0.9077544028 0.5025103031
LP/J both 2.1106346749 0.1039635424 2.3156920012 1.9055773486




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA