Project measure / variable:   Project1195   nmr_fat_mass__4wks__g

ID, description, units MPD:130110   nmr_fat_mass__4wks__g   nmr_fat_mass__4wks__g    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - nmr_fat_mass__4wks__g



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means0.96053   None 0.99857   None
Median of the strain means0.82737   None 0.8155   None
SD of the strain means± 0.4603 ± 0.62243
Coefficient of variation (CV)0.4792 0.6233
Min–max range of strain means0.49083   –   1.7138   None 0.41   –   2.304   None
Mean sample size per strain10.9   mice 10.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.2986 1.2986 9.3805 0.0025
strain 9 46.8967 5.2107 37.6415 < 0.0001
sex:strain 9 5.3144 0.5905 4.2656 < 0.0001
Residuals 195 26.994 0.1384


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 1.5189 0.5413   19 0.12418 0.3564 0.86, 3.22 1.21
C57BL/6J m 1.1806 0.35038   17 0.08498 0.2968 0.61, 1.97 0.29
GAIA/NachJ f 0.88273 0.21905   11 0.06605 0.2481 0.57, 1.36 -0.17
GAIA/NachJ m 0.896 0.14927   15 0.03854 0.1666 0.71, 1.21 -0.16
GAIC/NachJ f 1.26 0.74666   3 0.43108 0.5926 0.41, 1.81 0.65
GAIC/NachJ m 0.615 0.07778   2   0.055 0.1265 0.56, 0.67 -0.62
MANB/NachJ f 0.49083 0.15234   12 0.04398 0.3104 0.14, 0.68 -1.02
MANB/NachJ m 0.484 0.12331   10 0.03899 0.2548 0.29, 0.64 -0.83
MANE/NachJ f 0.496 0.17953   5 0.08029 0.3619 0.21, 0.66 -1.01
MANE/NachJ m 0.735 0.18652   6 0.07615 0.2538 0.55, 1.02 -0.42
MANF/NachJ f 0.57 0.25876   20 0.05786 0.454 0.32, 1.37 -0.85
MANF/NachJ m 0.48143 0.17029   14 0.04551 0.3537 0.14, 0.83 -0.83
SARA/NachJ f 1.3425 0.85453   4 0.42727 0.6365 0.74, 2.61 0.83
SARA/NachJ m 2.304 0.58439   10 0.1848 0.2536 1.35, 3.04 2.1
SARB/NachJ f 1.7138 0.60926   8 0.21541 0.3555 0.98, 2.93 1.64
SARB/NachJ m 1.7964 0.63235   11 0.19066 0.352 0.95, 2.97 1.28
SARC/NachJ f 0.772 0.25606   20 0.05726 0.3317 0.32, 1.21 -0.41
SARC/NachJ m 1.0833 0.36921   18 0.08702 0.3408 0.52, 1.77 0.14
TUCB/NachJ f 0.55857 0.08133   7 0.03074 0.1456 0.4, 0.63 -0.87
TUCB/NachJ m 0.41 0.13115   3 0.07572 0.3199 0.27, 0.53 -0.95


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 0.4908333333 0.107405369 0.7026586372 0.2790080295
129S1/SvImJ 2 0.484 0.1176566868 0.7160429944 0.2519570056
A/J 1 0.496 0.1663916822 0.8241583497 0.1678416503
A/J 2 0.735 0.1518941295 1.0345662176 0.4354337824
BALB/cJ 1 0.57 0.0831958411 0.7340791748 0.4059208252
BALB/cJ 2 0.4814285714 0.0994380494 0.6775406954 0.2853164475
BTBR T+ Itpr3tf/J 1 0.8827272727 0.1121812492 1.103971587 0.6614829585
BTBR T+ Itpr3tf/J 2 0.896 0.0960662825 1.0854623115 0.7065376885
C3H/HeJ 1 1.3425 0.1860315561 1.7093921887 0.9756078113
C3H/HeJ 2 2.304 0.1176566868 2.5360429944 2.0719570056
C57BL/6J 1 0.5585714286 0.1406266381 0.835915854 0.2812270031
C57BL/6J 2 0.41 0.214810738 0.8336506078 -0.0136506078
CAST/EiJ 1 1.26 0.214810738 1.6836506078 0.8363493922
CAST/EiJ 2 0.615 0.2630883497 1.1338639091 0.0961360909
DBA/2J 1 1.71375 0.1315441749 1.9731819546 1.4543180454
DBA/2J 2 1.7963636364 0.1121812492 2.0176079506 1.5751193221
FVB/NJ 1 0.772 0.0831958411 0.9360791748 0.6079208252
FVB/NJ 2 1.0833333333 0.0876961166 1.2562879697 0.910378697
LP/J 1 1.5189473684 0.0853571319 1.6872890498 1.350605687
LP/J 2 1.1805882353 0.0902385595 1.3585570879 1.0026193827


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.4874166667 0.0796539535 0.6445105165 0.3303228168
A/J both 0.6155 0.1126477014 0.837664253 0.393335747
BALB/cJ both 0.5257142857 0.0648256771 0.6535637487 0.3978648227
BTBR T+ Itpr3tf/J both 0.8893636364 0.0738467388 1.0350044738 0.743722799
C3H/HeJ both 1.82325 0.1100577528 2.040306346 1.606193654
C57BL/6J both 0.4842857143 0.1283739698 0.7374653777 0.2311060509
CAST/EiJ both 0.9375 0.1698227995 1.2724252132 0.6025747868
DBA/2J both 1.7550568182 0.086441458 1.9255370118 1.5845766246
FVB/NJ both 0.9276666667 0.0604403773 1.0468674237 0.8084659097
LP/J both 1.3497678019 0.062106436 1.4722543666 1.2272812371




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA