Project measure / variable:   Project1195   lightdark_stereotypic_episode_ct__centroid__dark_

ID, description, units MPD:130091   lightdark_stereotypic_episode_ct__centroid__dark_   lightdark_stereotypic_episode_ct__centroid__dark_    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - lightdark_stereotypic_episode_ct__centroid__dark_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means27.198   None 27.523   None
Median of the strain means26.901   None 27.125   None
SD of the strain means± 4.0996 ± 3.2515
Coefficient of variation (CV)0.1507 0.1181
Min–max range of strain means21.0   –   36.5   None 22.971   –   34.0   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 13.375 13.375 0.2721 0.6025
strain 9 1785.4862 198.3874 4.036 < 0.0001
sex:strain 9 240.9454 26.7717 0.5446 0.8406
Residuals 194 9535.9142 49.1542


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 27.452 7.4715   21 1.6304 0.2722 11.0, 44.0 0.06
C57BL/6J m 27.773 8.109   22 1.7288 0.292 15.5, 46.5 0.08
GAIA/NachJ f 26.35 6.5872   10 2.0831 0.25 15.0, 35.5 -0.21
GAIA/NachJ m 27.0 6.6036   15 1.705 0.2446 16.0, 41.5 -0.16
GAIC/NachJ f 29.5 9.9624   3 5.7518 0.3377 18.0, 35.5 0.56
GAIC/NachJ m 27.0 2.8284   2   2.0 0.1048 25.0, 29.0 -0.16
MANB/NachJ f 21.0 3.4713   11 1.0466 0.1653 16.5, 26.0 -1.51
MANB/NachJ m 23.0 3.9791   10 1.2583 0.173 15.0, 27.5 -1.39
MANE/NachJ f 28.5 4.3875   5 1.9621 0.1539 21.0, 32.0 0.32
MANE/NachJ m 29.5 5.8417   5 2.6125 0.198 24.0, 38.5 0.61
MANF/NachJ f 23.5 5.9116   20 1.3219 0.2516 15.0, 34.0 -0.9
MANF/NachJ m 27.25 4.6831   12 1.3519 0.1719 19.0, 37.5 -0.08
SARA/NachJ f 26.125 7.0873   4 3.5436 0.2713 20.0, 34.5 -0.26
SARA/NachJ m 30.1 10.972   10 3.4696 0.3645 18.0, 58.0 0.79
SARB/NachJ f 27.714 7.8997   7 2.9858 0.285 15.0, 38.5 0.13
SARB/NachJ m 26.636 4.1358   11 1.247 0.1553 20.5, 33.5 -0.27
SARC/NachJ f 25.342 10.367   19 2.3783 0.4091 16.5, 50.5 -0.45
SARC/NachJ m 22.971 5.9986   17 1.4549 0.2611 13.0, 38.5 -1.4
TUCB/NachJ f 36.5 5.0827   7 1.9211 0.1393 30.5, 44.0 2.27
TUCB/NachJ m 34.0 1.5   3 0.86603 0.0441 32.5, 35.5 1.99


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 21.0 2.1138976639 25.1691717296 16.8308282704
129S1/SvImJ 2 23.0 2.217074574 27.3726641996 18.6273358004
A/J 1 28.5 3.1354169313 34.6838810147 22.3161189853
A/J 2 29.5 3.1354169313 35.6838810147 23.3161189853
BALB/cJ 1 23.5 1.5677084657 26.5919405074 20.4080594926
BALB/cJ 2 27.25 2.0239029264 31.2416780308 23.2583219692
BTBR T+ Itpr3tf/J 1 26.35 2.217074574 30.7226641996 21.9773358004
BTBR T+ Itpr3tf/J 2 27.0 1.8102338093 30.5702653685 23.4297346315
C3H/HeJ 1 26.125 3.5055026981 33.0387891569 19.2112108431
C3H/HeJ 2 30.1 2.217074574 34.4726641996 25.7273358004
C57BL/6J 1 36.5 2.6499109599 41.7263333503 31.2736666497
C57BL/6J 2 34.0 4.0478058528 41.9833560617 26.0166439383
CAST/EiJ 1 29.5 4.0478058528 37.4833560617 21.5166439383
CAST/EiJ 2 27.0 4.9575294586 36.777574393 17.222425607
DBA/2J 1 27.7142857143 2.6499109599 32.9406190646 22.4879523639
DBA/2J 2 26.6363636364 2.1138976639 30.805535366 22.4671919067
FVB/NJ 1 25.3421052632 1.6084349481 28.5143692897 22.1698412367
FVB/NJ 2 22.9705882353 1.7004185759 26.3242685844 19.6169078862
LP/J 1 27.4523809524 1.529926806 30.4698059191 24.4349559857
LP/J 2 27.7727272727 1.4947513728 30.7207768747 24.8246776708


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 22.0 1.5316643725 25.0208519127 18.9791480873
A/J both 29.0 2.217074574 33.3726641996 24.6273358004
BALB/cJ both 25.375 1.2800286021 27.8995588527 22.8504411473
BTBR T+ Itpr3tf/J both 26.675 1.4311154837 29.4975426039 23.8524573961
C3H/HeJ both 28.1125 2.0738833642 32.2027528256 24.0222471744
C57BL/6J both 35.25 2.4190266802 40.0209677817 30.4790322183
CAST/EiJ both 28.25 3.2000715053 34.5613971318 21.9386028682
DBA/2J both 27.1753246753 1.6948887448 30.5180987179 23.8325506327
FVB/NJ both 24.1563467492 1.1703083264 26.4645078646 21.8481856339
LP/J both 27.6125541126 1.0694575375 29.7218104913 25.5032977338




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA