Project measure / variable:   Project1195   clinchem_pct_retic

ID, description, units MPD:130008   clinchem_pct_retic   clinchem_pct_retic    
Data set, strains Project1195   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1195 - clinchem_pct_retic



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means3.3784   None 3.6688   None
Median of the strain means3.2978   None 3.3579   None
SD of the strain means± 0.75469 ± 0.90315
Coefficient of variation (CV)0.2234 0.2462
Min–max range of strain means2.1767   –   4.8733   None 2.6692   –   5.45   None
Mean sample size per strain7.2   mice 6.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 12.4647 12.4647 5.0341 0.0267
strain 8 43.2758 5.4095 2.1847 0.0333
sex:strain 8 35.4082 4.426 1.7875 0.0861
Residuals 119 294.6502 2.4761


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 3.6056 0.35581   9 0.1186 0.0987 3.08, 4.18 0.3
C57BL/6J m 4.115 0.38895   8 0.13752 0.0945 3.64, 4.65 0.49
GAIA/NachJ f 3.956 0.27941   10 0.08836 0.0706 3.49, 4.33 0.77
GAIA/NachJ m 4.698 0.52526   15 0.13562 0.1118 4.03, 5.7 1.14
GAIC/NachJ f 3.835 0.44548   2   0.315 0.1162 3.52, 4.15 0.6
GAIC/NachJ m 3.17 0.0   1   0.0 0.0 3.17, 3.17 -0.55
MANB/NachJ f 2.1767 0.31086   3 0.17947 0.1428 1.82, 2.39 -1.59
MANB/NachJ m 5.45 5.8186   6 2.3754 1.0676 1.69, 16.83 1.97
MANE/NachJ f 3.028 2.9532   5 1.3207 0.9753 1.35, 8.29 -0.46
MANE/NachJ m 2.758 0.44952   5 0.20103 0.163 2.21, 3.4 -1.01
MANF/NachJ f 2.704 0.58699   15 0.15156 0.2171 1.89, 3.85 -0.89
MANF/NachJ m 4.1 2.8611   9 0.95369 0.6978 2.08, 10.92 0.48
SARA/NachJ f 3.55 0.78367   4 0.39183 0.2208 2.75, 4.61 0.23
SARA/NachJ m 3.012 0.42293   5 0.18914 0.1404 2.32, 3.41 -0.73
SARB/NachJ f 4.8733 0.9487   3 0.54773 0.1947 4.07, 5.92 1.98
SARB/NachJ m 3.4625 1.1537   4 0.57686 0.3332 2.38, 5.09 -0.23
SARC/NachJ f 3.0457 0.35112   14 0.09384 0.1153 2.17, 3.72 -0.44
SARC/NachJ m 2.6692 0.34403   12 0.09931 0.1289 2.11, 3.09 -1.11
TUCB/NachJ f 3.01 0.40012   7 0.15123 0.1329 2.41, 3.54 -0.49
TUCB/NachJ m 3.2533 0.40017   3 0.23104 0.123 2.86, 3.66 -0.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 3.028 0.7037119012 4.4214198487 1.6345801513
129S1/SvImJ 2 2.758 0.7037119012 4.1514198487 1.3645801513
A/J 1 2.704 0.4062882556 3.5084913247 1.8995086753
A/J 2 4.1 0.5245158826 5.1385938343 3.0614061657
BALB/cJ 1 3.55 0.7867738238 5.1078907514 1.9921092486
BALB/cJ 2 3.012 0.7037119012 4.4054198487 1.6185801513
BTBR T+ Itpr3tf/J 1 3.956 0.4975994573 4.941296624 2.970703376
BTBR T+ Itpr3tf/J 2 4.698 0.4062882556 5.5024913247 3.8935086753
C3H/HeJ 1 3.01 0.5947451074 4.1876547137 1.8323452863
C3H/HeJ 2 3.2533333333 0.908488158 5.0522306227 1.454436044
C57BL/6J 1 4.8733333333 0.908488158 6.6722306227 3.074436044
C57BL/6J 2 3.4625 0.7867738238 5.0203907514 1.9046092486
CAST/EiJ 1 2.1766666667 0.908488158 3.975563956 0.3777693773
CAST/EiJ 2 5.45 0.6423981371 6.722012472 4.177987528
DBA/2J 1 3.0457142857 0.4205482985 3.8784419197 2.2129866518
DBA/2J 2 2.6691666667 0.454244079 3.5686153114 1.769718022
FVB/NJ 1 3.6055555556 0.5245158826 4.6441493898 2.5669617213
FVB/NJ 2 4.115 0.5563331061 5.2165951147 3.0134048853


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.893 0.4975994573 3.878296624 1.907703376
A/J both 3.402 0.3317329716 4.058864416 2.745135584
BALB/cJ both 3.281 0.5277839259 4.3260648865 2.2359351135
BTBR T+ Itpr3tf/J both 4.327 0.3211990686 4.963006236 3.690993764
C3H/HeJ both 3.1316666667 0.5429255188 4.2067134194 2.0566199139
C57BL/6J both 4.1679166667 0.6009084338 5.3577753821 2.9780579512
CAST/EiJ both 3.8133333333 0.5563331061 4.914928448 2.7117382187
DBA/2J both 2.8574404762 0.3095151671 3.4703114204 2.244569532
FVB/NJ both 3.8602777778 0.3823033599 4.6172766135 3.103278942




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA