Project measure / variable:   Project1194   lightdark_rest_time__crossover__light__pct_total

ID, description, units MPD:129889   lightdark_rest_time__crossover__light__pct_total   lightdark_rest_time__crossover__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_rest_time__crossover__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means41.683   None 41.514   None
Median of the strain means43.545   None 42.817   None
SD of the strain means± 9.4356 ± 7.1844
Coefficient of variation (CV)0.2264 0.1731
Min–max range of strain means23.281   –   56.08   None 27.533   –   53.06   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 81.3632 81.3632 0.3466 0.5567
strain 9 4950.5019 550.0558 2.343 0.0157
sex:strain 9 2713.0495 301.4499 1.284 0.2476
Residuals 194 45544.4573 234.7652


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 34.452 16.925   21 3.6933 0.4913 11.427, 66.52 -0.77
C57BL/6J m 43.729 20.991   22 4.4753 0.48 5.696, 82.92 0.31
GAIA/NachJ f 48.161 10.756   10 3.4013 0.2233 28.26, 64.14 0.69
GAIA/NachJ m 45.859 7.6877   15 1.985 0.1676 28.934, 55.86 0.6
GAIC/NachJ f 23.281 8.7182   3 5.0335 0.3745 17.687, 33.326 -1.95
GAIC/NachJ m 34.828 6.6772   2   4.7215 0.1917 30.107, 39.55 -0.93
MANB/NachJ f 45.624 15.741   11 4.7461 0.345 22.136, 76.23 0.42
MANB/NachJ m 41.906 13.2   10 4.1742 0.315 21.639, 57.4 0.05
MANE/NachJ f 56.08 6.706   5 2.999 0.1196 47.603, 65.12 1.53
MANE/NachJ m 53.06 14.361   5 6.4225 0.2706 36.746, 69.64 1.61
MANF/NachJ f 48.066 8.4927   20 1.899 0.1767 33.403, 67.37 0.68
MANF/NachJ m 37.195 11.661   12 3.3662 0.3135 18.234, 58.74 -0.6
SARA/NachJ f 46.919 17.817   4 8.9086 0.3797 29.579, 71.27 0.55
SARA/NachJ m 44.514 15.798   10 4.9957 0.3549 14.639, 63.37 0.42
SARB/NachJ f 41.466 15.642   7 5.912 0.3772 23.422, 71.64 -0.02
SARB/NachJ m 39.174 10.29   11 3.1026 0.2627 24.918, 57.76 -0.33
SARC/NachJ f 39.658 19.977   19 4.5831 0.5037 0.69311, 76.71 -0.21
SARC/NachJ m 47.344 19.541   17 4.7393 0.4127 1.7511, 68.69 0.81
TUCB/NachJ f 33.123 14.518   7 5.4874 0.4383 11.874, 50.35 -0.91
TUCB/NachJ m 27.533 12.187   3 7.036 0.4426 13.858, 37.244 -1.95


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 45.6243636364 4.6197721676 54.7357902905 36.5129369822
129S1/SvImJ 2 41.9064 4.8452579259 51.4625448943 32.3502551057
A/J 1 56.0806 6.8522294721 69.5950297136 42.5661702864
A/J 2 53.062 6.8522294721 66.5764297136 39.5475702864
BALB/cJ 1 48.06605 3.426114736 54.8232648568 41.3088351432
BALB/cJ 2 37.1951666667 4.423095105 45.9186935357 28.4716397976
BTBR T+ Itpr3tf/J 1 48.1614 4.8452579259 57.7175448943 38.6052551057
BTBR T+ Itpr3tf/J 2 45.8587333333 3.9561365302 53.6612929664 38.0561737003
C3H/HeJ 1 46.919 7.6610254485 62.0285917583 31.8094082417
C3H/HeJ 2 44.5143 4.8452579259 54.0704448943 34.9581551057
C57BL/6J 1 33.1225714286 5.7911908927 44.5443492012 21.7007936559
C57BL/6J 2 27.5333333333 8.8461902099 44.9803870714 10.0862795953
CAST/EiJ 1 23.2806666667 8.8461902099 40.7277204047 5.8336129286
CAST/EiJ 2 34.8285 10.8343260909 56.1966895866 13.4603104134
DBA/2J 1 41.466 5.7911908927 52.8877777727 30.0442222273
DBA/2J 2 39.1739090909 4.6197721676 48.2853357451 30.0624824368
FVB/NJ 1 39.6579110526 3.5151195509 46.5906672161 32.7251548892
FVB/NJ 2 47.3435764706 3.7161431911 54.6728050329 40.0143479083
LP/J 1 34.4518095238 3.3435456208 41.0461759955 27.8574430521
LP/J 2 43.7288636364 3.2666722273 50.1716152098 37.2861120629


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 43.7653818182 3.3473429481 50.3672376352 37.1635260011
A/J both 54.5713 4.8452579259 64.1274448943 45.0151551057
BALB/cJ both 42.6306083333 2.7974109678 48.1478511605 37.1133655062
BTBR T+ Itpr3tf/J both 47.0100666667 3.1276005425 53.1785316716 40.8416016617
C3H/HeJ both 45.71665 4.5323237774 54.6556050332 36.7776949668
C57BL/6J both 30.327952381 5.2866098112 40.7545612691 19.9013434928
CAST/EiJ both 29.0545833333 6.9935274196 42.8476904012 15.2614762654
DBA/2J both 40.3199545455 3.7040581406 47.625348155 33.0145609359
FVB/NJ both 43.5007437616 2.5576251521 48.5450648096 38.4564227136
LP/J both 39.0903365801 2.3372229653 43.699965551 34.4807076091




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA