Project measure / variable:   Project1194   lightdark_ambulatory_time__crossover__light__pct_total

ID, description, units MPD:129849   lightdark_ambulatory_time__crossover__light__pct_total   lightdark_ambulatory_time__crossover__light__pct_total    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_ambulatory_time__crossover__light__pct_total



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means51.54   None 50.59   None
Median of the strain means50.1   None 51.34   None
SD of the strain means± 4.7162 ± 6.367
Coefficient of variation (CV)0.0915 0.1259
Min–max range of strain means44.048   –   58.89   None 34.578   –   57.75   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0415 0.0415 0.0004 0.9842
strain 9 2972.449 330.2721 3.1376 0.0015
sex:strain 9 834.7294 92.7477 0.8811 0.5431
Residuals 194 20420.6559 105.2611


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 49.946 6.9584   21 1.5184 0.1393 36.778, 62.02 -0.34
C57BL/6J m 51.42 11.198   22 2.3873 0.2178 31.424, 69.07 0.13
GAIA/NachJ f 58.89 4.5402   10 1.4357 0.0771 50.13, 64.26 1.56
GAIA/NachJ m 56.93 6.1796   15 1.5956 0.1085 50.5, 73.06 1.0
GAIC/NachJ f 48.35 7.6321   3 4.4064 0.1579 39.541, 52.97 -0.68
GAIC/NachJ m 49.776 1.0798   2   0.7635 0.0217 49.013, 50.54 -0.13
MANB/NachJ f 50.25 9.9343   11 2.9953 0.1977 30.562, 60.38 -0.27
MANB/NachJ m 51.46 7.9665   10 2.5192 0.1548 32.788, 60.28 0.14
MANE/NachJ f 54.78 5.7402   5 2.5671 0.1048 45.912, 60.75 0.69
MANE/NachJ m 53.83 5.8908   5 2.6345 0.1094 47.232, 60.28 0.51
MANF/NachJ f 56.92 5.1046   20 1.1414 0.0897 49.276, 64.98 1.14
MANF/NachJ m 48.632 6.6855   12 1.9299 0.1375 35.173, 57.89 -0.31
SARA/NachJ f 48.004 5.6975   4 2.8488 0.1187 39.974, 53.43 -0.75
SARA/NachJ m 50.27 9.6064   10 3.0378 0.1911 30.06, 61.12 -0.05
SARB/NachJ f 55.51 9.6497   7 3.6473 0.1738 41.741, 68.14 0.84
SARB/NachJ m 57.75 4.7688   11 1.4378 0.0826 49.923, 67.51 1.12
SARC/NachJ f 48.721 19.439   19 4.4597 0.399 5.0013, 64.86 -0.6
SARC/NachJ m 51.27 14.335   17 3.4767 0.2796 15.551, 62.95 0.11
TUCB/NachJ f 44.048 9.9096   7 3.7455 0.225 27.062, 56.9 -1.59
TUCB/NachJ m 34.578 19.659   3 11.35 0.5685 12.803, 51.02 -2.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 50.2455454545 3.0934110735 56.3465796797 44.1445112294
129S1/SvImJ 2 51.4597 3.2443969049 57.8585186783 45.0608813217
A/J 1 54.7844 4.5882701046 63.8336961581 45.7351038419
A/J 2 53.8294 4.5882701046 62.8786961581 44.7801038419
BALB/cJ 1 56.9163 2.2941350523 61.440948079 52.391651921
BALB/cJ 2 48.632 2.9617156172 54.4732955525 42.7907044475
BTBR T+ Itpr3tf/J 1 58.89 3.2443969049 65.2888186783 52.4911813217
BTBR T+ Itpr3tf/J 2 56.9313333333 2.64903898 62.1559469062 51.7067197605
C3H/HeJ 1 48.0035 5.1298419265 58.120920679 37.886079321
C3H/HeJ 2 50.2734 3.2443969049 56.6722186783 43.8745813217
C57BL/6J 1 44.0482857143 3.8777960008 51.6963368646 36.400234564
C57BL/6J 2 34.578 5.9234312344 46.260591105 22.895408895
CAST/EiJ 1 48.3503333333 5.9234312344 60.0329244384 36.6677422283
CAST/EiJ 2 49.7765 7.2546920253 64.0846935405 35.4683064595
DBA/2J 1 55.5077142857 3.8777960008 63.155765436 47.8596631354
DBA/2J 2 57.7493636364 3.0934110735 63.8503978615 51.6483294112
FVB/NJ 1 48.7206052632 2.3537329004 53.3627962431 44.0784142833
FVB/NJ 2 51.2705882353 2.488338836 56.1782581316 46.362918339
LP/J 1 49.9458571429 2.2388465649 54.3614615333 45.5302527525
LP/J 2 51.4171818182 2.1873719471 55.731264491 47.1030991453


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 50.8526227273 2.2413892648 55.2732420022 46.4320034524
A/J both 54.3069 3.2443969049 60.7057186783 47.9080813217
BALB/cJ both 52.77415 1.8731534264 56.4685096864 49.0797903136
BTBR T+ Itpr3tf/J both 57.9106666667 2.0942491969 62.0410863628 53.7802469706
C3H/HeJ both 49.13845 3.0348554112 55.1239967936 43.1529032064
C57BL/6J both 39.3131428571 3.5399272384 46.2948264171 32.3314592972
CAST/EiJ both 49.0634166667 4.682883566 58.2993158828 39.8275174506
DBA/2J both 56.628538961 2.4802466557 61.5202489129 51.7368290091
FVB/NJ both 49.9955967492 1.7125922405 53.3732868218 46.6179066767
LP/J both 50.6815194805 1.5650103814 53.768138644 47.5949003171




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA