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Project measure / variable:   Project1194   lightdark_vertical_activity_time__query__total__s

ID, description, units MPD:129834   lightdark_vertical_activity_time__query__total__s   lightdark_vertical_activity_time__query__total__s    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_vertical_activity_time__query__total__s



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means21.866   None 21.149   None
Median of the strain means21.335   None 18.392   None
SD of the strain means± 7.9064 ± 9.1219
Coefficient of variation (CV)0.3616 0.4313
Min–max range of strain means11.107   –   34.802   None 12.157   –   39.068   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0039 0.0039 0.0 0.9973
strain 9 12908.3678 1434.2631 4.3368 < 0.0001
sex:strain 9 2340.8014 260.089 0.7864 0.6292
Residuals 194 64159.5423 330.7193


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 11.107 14.945   21 3.2612 1.3455 0.3, 70.53 -1.36
C57BL/6J m 12.157 5.2906   22 1.128 0.4352 3.485, 21.03 -0.99
GAIA/NachJ f 33.114 7.1588   10 2.2638 0.2162 25.24, 49.965 1.42
GAIA/NachJ m 39.068 10.504   15 2.712 0.2689 22.97, 60.4 1.96
GAIC/NachJ f 22.325 11.031   3 6.3686 0.4941 10.505, 32.345 0.06
GAIC/NachJ m 31.517 5.922   2   4.1875 0.1879 27.33, 35.705 1.14
MANB/NachJ f 34.802 69.23   11 20.875 1.9893 9.3, 243.2 1.64
MANB/NachJ m 16.622 3.4139   10 1.0796 0.2054 11.295, 21.35 -0.5
MANE/NachJ f 16.572 6.2089   5 2.7767 0.3747 7.835, 25.215 -0.67
MANE/NachJ m 13.497 11.015   5 4.926 0.8161 1.425, 26.235 -0.84
MANF/NachJ f 20.345 4.8343   20 1.081 0.2376 10.485, 27.77 -0.19
MANF/NachJ m 20.163 8.1762   12 2.3603 0.4055 9.365, 39.13 -0.11
SARA/NachJ f 12.742 7.2705   4 3.6353 0.5706 2.43, 17.875 -1.15
SARA/NachJ m 12.402 8.8305   10 2.7924 0.712 2.785, 29.58 -0.96
SARB/NachJ f 25.929 19.315   7 7.3004 0.7449 5.255, 61.46 0.51
SARB/NachJ m 28.805 4.5445   11 1.3702 0.1578 23.205, 36.99 0.84
SARC/NachJ f 17.647 8.5142   19 1.9533 0.4825 3.995, 30.39 -0.53
SARC/NachJ m 21.034 9.5347   17 2.3125 0.4533 1.285, 41.07 -0.01
TUCB/NachJ f 24.075 10.286   7 3.8879 0.4273 13.46, 44.345 0.28
TUCB/NachJ m 16.222 11.515   3 6.6483 0.7099 4.91, 27.93 -0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 34.8022727273 5.4831915923 45.6165934798 23.9879519748
129S1/SvImJ 2 16.622 5.7508198583 27.9641552922 5.2798447078
A/J 1 16.572 8.1328874383 32.6122298407 0.5317701593
A/J 2 13.497 8.1328874383 29.5372298407 -2.5432298407
BALB/cJ 1 20.345 4.0664437192 28.3651149204 12.3248850796
BALB/cJ 2 20.1633333333 5.2497562675 30.5172571737 9.8094094929
BTBR T+ Itpr3tf/J 1 33.1135 5.7508198583 44.4556552922 21.7713447078
BTBR T+ Itpr3tf/J 2 39.0676666667 4.6955247518 48.3284976831 29.8068356503
C3H/HeJ 1 12.7425 9.0928445827 30.6760221493 -5.1910221493
C3H/HeJ 2 12.4025 5.7508198583 23.7446552922 1.0603447078
C57BL/6J 1 24.075 6.8735444217 37.6314684967 10.5185315033
C57BL/6J 2 16.2216666667 10.4995125351 36.9295143475 -4.4861810142
CAST/EiJ 1 22.325 10.4995125351 43.0328476808 1.6171523192
CAST/EiJ 2 31.5175 12.8592241294 56.8793302447 6.1556697553
DBA/2J 1 25.9285714286 6.8735444217 39.4850399253 12.3721029319
DBA/2J 2 28.8054545455 5.4831915923 39.619775298 17.991133793
FVB/NJ 1 17.6468421053 4.1720832258 25.8753063948 9.4183778157
FVB/NJ 2 21.0344117647 4.4106774885 29.7334477719 12.3353757575
LP/J 1 11.1069047619 3.9684427222 18.9337354977 3.2800740261
LP/J 2 12.1575 3.8772019575 19.804379538 4.510620462


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.7121363636 3.9729497568 33.5478561776 17.8764165497
A/J both 15.0345 5.7508198583 26.3766552922 3.6923447078
BALB/cJ both 20.2541666667 3.3202373932 26.8025630778 13.7057702555
BTBR T+ Itpr3tf/J both 36.0905833333 3.7121382563 43.4119130928 28.7692535739
C3H/HeJ both 12.5725 5.3793994007 23.1821147827 1.9628852173
C57BL/6J both 20.1483333333 6.274658883 32.5236393263 7.7730273404
CAST/EiJ both 26.92125 8.3005934831 43.2922410278 10.5502589722
DBA/2J both 27.367012987 4.3963337838 36.0377593713 18.6962666028
FVB/NJ both 19.340626935 3.0356364386 25.3277141236 13.3535397463
LP/J both 11.632202381 2.7740418462 17.1033550483 6.1610497136




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA