Project measure / variable:   Project1194   lightdark_stereotypic_episode_count__whole_body__total_

ID, description, units MPD:129811   lightdark_stereotypic_episode_count__whole_body__total_   lightdark_stereotypic_episode_count__whole_body__total_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_stereotypic_episode_count__whole_body__total_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means43.706   None 44.179   None
Median of the strain means45.453   None 42.888   None
SD of the strain means± 5.681 ± 5.0489
Coefficient of variation (CV)0.13 0.1143
Min–max range of strain means34.091   –   51.6   None 37.75   –   52.1   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 185.0514 185.0514 3.8398 0.0515
strain 9 3748.3937 416.4882 8.6421 < 0.0001
sex:strain 9 679.8661 75.5407 1.5675 0.1274
Residuals 194 9349.4645 48.1931


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 45.738 7.6348   21 1.6661 0.1669 33.5, 64.0 0.36
C57BL/6J m 47.636 5.9725   22 1.2733 0.1254 38.0, 62.0 0.68
GAIA/NachJ f 46.55 8.1461   10 2.576 0.175 35.5, 62.0 0.5
GAIA/NachJ m 44.067 7.5258   15 1.9432 0.1708 31.0, 55.5 -0.02
GAIC/NachJ f 45.167 0.57735   3 0.33333 0.0128 44.5, 45.5 0.26
GAIC/NachJ m 37.75 8.8388   2   6.25 0.2341 31.5, 44.0 -1.27
MANB/NachJ f 34.091 7.1757   11 2.1636 0.2105 25.5, 43.0 -1.69
MANB/NachJ m 39.05 5.7031   10 1.8035 0.146 33.5, 51.0 -1.02
MANE/NachJ f 51.6 5.8885   5 2.6334 0.1141 43.0, 59.5 1.39
MANE/NachJ m 52.1 6.2988   5 2.8169 0.1209 46.0, 62.5 1.57
MANF/NachJ f 39.2 7.4382   20 1.6632 0.1897 27.0, 54.0 -0.79
MANF/NachJ m 41.708 3.6956   12 1.0668 0.0886 32.0, 46.0 -0.49
SARA/NachJ f 37.375 6.5622   4 3.2811 0.1756 31.5, 46.5 -1.11
SARA/NachJ m 48.35 9.3958   10 2.9712 0.1943 34.5, 62.5 0.83
SARB/NachJ f 49.643 10.447   7 3.9486 0.2104 36.5, 63.5 1.05
SARB/NachJ m 50.14 6.742   11 2.0328 0.1345 36.5, 61.0 1.18
SARC/NachJ f 40.263 5.303   19 1.2166 0.1317 31.0, 49.5 -0.61
SARC/NachJ m 39.824 7.0199   17 1.7026 0.1763 23.0, 48.5 -0.86
TUCB/NachJ f 47.429 7.0618   7 2.6691 0.1489 38.0, 58.0 0.66
TUCB/NachJ m 41.167 4.0104   3 2.3154 0.0974 37.0, 45.0 -0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 34.0909090909 2.0931298049 38.2191210465 29.9626971353
129S1/SvImJ 2 39.05 2.1952930597 43.3797052262 34.7202947738
A/J 1 51.6 3.1046132184 57.723127852 45.476872148
A/J 2 52.1 3.1046132184 58.223127852 45.976872148
BALB/cJ 1 39.2 1.5523066092 42.261563926 36.138436074
BALB/cJ 2 41.7083333333 2.0040192152 45.6607953662 37.7558713004
BTBR T+ Itpr3tf/J 1 46.55 2.1952930597 50.8797052262 42.2202947738
BTBR T+ Itpr3tf/J 2 44.0666666667 1.7924492774 47.6018561803 40.5314771531
C3H/HeJ 1 37.375 3.4710631001 44.2208650559 30.5291349441
C3H/HeJ 2 48.35 2.1952930597 52.6797052262 44.0202947738
C57BL/6J 1 47.4285714286 2.6238770708 52.6035589849 42.2535838722
C57BL/6J 2 41.1666666667 4.0080384305 49.0715907324 33.2617426009
CAST/EiJ 1 45.1666666667 4.0080384305 53.0715907324 37.2617426009
CAST/EiJ 2 37.75 4.9088245121 47.4315152083 28.0684847917
DBA/2J 1 49.6428571429 2.6238770708 54.8178446992 44.4678695865
DBA/2J 2 50.1363636364 2.0931298049 54.264575592 46.0081516807
FVB/NJ 1 40.2631578947 1.5926329769 43.4042562063 37.1220595832
FVB/NJ 2 39.8235294118 1.6837129171 43.1442617323 36.5027970912
LP/J 1 45.7380952381 1.5148961332 48.7258756968 42.7503147794
LP/J 2 47.6363636364 1.4800662789 50.5554503044 44.7172769684


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 36.5704545455 1.5166166291 39.5616282823 33.5792808086
A/J both 51.85 2.1952930597 56.1797052262 47.5202947738
BALB/cJ both 40.4541666667 1.267453039 42.9539231445 37.9544101888
BTBR T+ Itpr3tf/J both 45.3083333333 1.4170555767 48.1031460392 42.5135206275
C3H/HeJ both 42.8625 2.0535086233 46.9125683855 38.8124316145
C57BL/6J both 44.2976190476 2.3952610997 49.0217147466 39.5735233486
CAST/EiJ both 41.4583333333 3.1686325974 47.707724528 35.2089421387
DBA/2J both 49.8896103896 1.6782374134 53.199543552 46.5796772272
FVB/NJ both 40.0433436533 1.1588107035 42.3288283801 37.7578589264
LP/J both 46.6872294372 1.058950717 48.775763555 44.5986953194




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA