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Project measure / variable:   Project1194   lightdark_stereotypic_episode_count__centroid__total_

ID, description, units MPD:129808   lightdark_stereotypic_episode_count__centroid__total_   lightdark_stereotypic_episode_count__centroid__total_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_stereotypic_episode_count__centroid__total_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means44.678   None 45.604   None
Median of the strain means46.209   None 44.284   None
SD of the strain means± 5.374 ± 5.342
Coefficient of variation (CV)0.1203 0.1171
Min–max range of strain means35.727   –   52.2   None 38.0   –   52.8   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 298.5166 298.5166 5.883 0.0162
strain 9 3951.8692 439.0966 8.6535 < 0.0001
sex:strain 9 650.5305 72.2812 1.4245 0.1798
Residuals 194 9844.0104 50.7423


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 47.167 7.6425   21 1.6677 0.162 35.0, 64.5 0.46
C57BL/6J m 49.659 5.949   22 1.2683 0.1198 39.5, 62.5 0.76
GAIA/NachJ f 46.75 8.0459   10 2.5443 0.1721 36.5, 62.0 0.39
GAIA/NachJ m 44.567 7.6131   15 1.9657 0.1708 31.5, 56.0 -0.19
GAIC/NachJ f 45.667 0.28868   3 0.16667 0.0063 45.5, 46.0 0.18
GAIC/NachJ m 38.0 9.1924   2   6.5 0.2419 31.5, 44.5 -1.42
MANB/NachJ f 35.727 6.987   11 2.1067 0.1956 26.0, 45.5 -1.67
MANB/NachJ m 40.2 6.3692   10 2.0141 0.1584 34.0, 53.5 -1.01
MANE/NachJ f 52.2 5.8052   5 2.5962 0.1112 43.5, 59.5 1.4
MANE/NachJ m 52.8 6.409   5 2.8662 0.1214 47.0, 63.5 1.35
MANF/NachJ f 39.487 7.5883   20 1.6968 0.1922 27.5, 54.0 -0.97
MANF/NachJ m 42.375 3.7967   12 1.096 0.0896 32.5, 47.0 -0.6
SARA/NachJ f 39.5 7.2915   4 3.6458 0.1846 33.5, 50.0 -0.96
SARA/NachJ m 51.35 9.5162   10 3.0093 0.1853 37.5, 68.0 1.08
SARB/NachJ f 50.71 10.649   7 4.025 0.21 37.0, 65.0 1.12
SARB/NachJ m 51.68 5.8876   11 1.7752 0.1139 39.0, 61.0 1.14
SARC/NachJ f 41.5 6.4593   19 1.4819 0.1556 31.5, 54.0 -0.59
SARC/NachJ m 41.412 7.7827   17 1.8876 0.1879 23.0, 53.5 -0.78
TUCB/NachJ f 48.071 7.2768   7 2.7504 0.1514 38.0, 58.5 0.63
TUCB/NachJ m 44.0 2.1794   3 1.2583 0.0495 42.5, 46.5 -0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 35.7272727273 2.1477752062 39.9632600337 31.4912854209
129S1/SvImJ 2 40.2 2.2526056401 44.6427409677 35.7572590323
A/J 1 52.2 3.1856654469 58.4829845306 45.9170154694
A/J 2 52.8 3.1856654469 59.0829845306 46.5170154694
BALB/cJ 1 39.4875 1.5928327235 42.6289922653 36.3460077347
BALB/cJ 2 42.375 2.0563382038 46.4306490753 38.3193509247
BTBR T+ Itpr3tf/J 1 46.75 2.2526056401 51.1927409677 42.3072590323
BTBR T+ Itpr3tf/J 2 44.5666666667 1.8392448033 48.1941494767 40.9391838566
C3H/HeJ 1 39.5 3.5616822464 46.524590256 32.475409744
C3H/HeJ 2 51.35 2.2526056401 55.7927409677 46.9072590323
C57BL/6J 1 48.0714285714 2.6923787066 53.3815196799 42.761337463
C57BL/6J 2 44.0 4.1126764075 52.1112981505 35.8887018495
CAST/EiJ 1 45.6666666667 4.1126764075 53.7779648172 37.5553685161
CAST/EiJ 2 38.0 5.0369793378 47.9342708102 28.0657291898
DBA/2J 1 50.7142857143 2.6923787066 56.0243768227 45.4041946058
DBA/2J 2 51.6818181818 2.1477752062 55.9178054882 47.4458308754
FVB/NJ 1 41.5 1.6342118928 44.7231030575 38.2768969425
FVB/NJ 2 41.4117647059 1.7276696596 44.8191914826 38.0043379291
LP/J 1 47.1666666667 1.554445571 50.2324491976 44.1008841358
LP/J 2 49.6590909091 1.5187064127 52.6543862585 46.6637955597


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 37.9636363636 1.5562109839 41.0329007611 34.8943719662
A/J both 52.5 2.2526056401 56.9427409677 48.0572590323
BALB/cJ both 40.93125 1.3005424727 43.4962676936 38.3662323064
BTBR T+ Itpr3tf/J both 45.6583333333 1.4540506883 48.5261102966 42.7905563701
C3H/HeJ both 45.425 2.1071196332 49.5808036398 41.2691963602
C57BL/6J both 46.0357142857 2.4577942516 50.8831420899 41.1882864815
CAST/EiJ both 41.8333333333 3.2513561817 48.2458775674 35.4207890992
DBA/2J both 51.1980519481 1.7220512068 54.5943976328 47.8017062633
FVB/NJ both 41.4558823529 1.1890638086 43.8010342967 39.1107304092
LP/J both 48.4128787879 1.0865967745 50.5559383272 46.2698192485




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA