Project measure / variable:   Project1194   lightdark_stereotypic_activity_count__centroid__total_

ID, description, units MPD:129800   lightdark_stereotypic_activity_count__centroid__total_   lightdark_stereotypic_activity_count__centroid__total_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
Ontology mappings


  STRAIN COMPARISON PLOT
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Project1194 - lightdark_stereotypic_activity_count__centroid__total_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means122.9   None 119.9   None
Median of the strain means122.3   None 117.2   None
SD of the strain means± 16.07 ± 12.655
Coefficient of variation (CV)0.1308 0.1056
Min–max range of strain means103.0   –   143.7   None 102.2   –   142.4   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0748 0.0748 0.0002 0.9898
strain 9 26852.4334 2983.6037 6.5174 < 0.0001
sex:strain 9 4227.3056 469.7006 1.026 0.4206
Residuals 194 88811.6302 457.7919


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 111.6 19.504   21 4.256 0.1748 77.0, 156.0 -0.7
C57BL/6J m 112.3 15.379   22 3.2788 0.1369 84.0, 145.0 -0.6
GAIA/NachJ f 134.7 29.775   10 9.4158 0.221 96.0, 181.0 0.74
GAIA/NachJ m 127.7 30.603   15 7.9016 0.2397 81.0, 185.5 0.62
GAIC/NachJ f 143.5 4.9244   3 2.8431 0.0343 139.5, 149.0 1.28
GAIC/NachJ m 121.2 15.203   2   10.75 0.1254 110.5, 132.0 0.1
MANB/NachJ f 103.0 20.997   11 6.3308 0.2038 75.0, 144.5 -1.24
MANB/NachJ m 107.9 17.765   10 5.6178 0.1646 83.5, 147.0 -0.95
MANE/NachJ f 143.7 15.861   5 7.0933 0.1104 118.5, 159.5 1.3
MANE/NachJ m 142.4 16.558   5 7.4051 0.1163 128.5, 168.5 1.78
MANF/NachJ f 112.9 22.662   20 5.0674 0.2007 83.0, 158.0 -0.62
MANF/NachJ m 113.3 13.983   12 4.0365 0.1234 87.5, 139.0 -0.52
SARA/NachJ f 104.4 14.654   4 7.3268 0.1404 90.0, 123.5 -1.15
SARA/NachJ m 129.1 22.106   10 6.9904 0.1712 92.5, 162.5 0.73
SARB/NachJ f 131.7 33.353   7 12.606 0.2532 99.0, 187.5 0.55
SARB/NachJ m 132.0 24.523   11 7.3939 0.1857 98.5, 182.0 0.96
SARC/NachJ f 109.7 18.602   19 4.2676 0.1696 63.5, 150.5 -0.82
SARC/NachJ m 102.2 21.247   17 5.1532 0.2079 55.5, 126.0 -1.4
TUCB/NachJ f 133.4 17.473   7 6.6042 0.131 109.5, 155.0 0.66
TUCB/NachJ m 110.8 17.214   3 9.9387 0.1553 91.5, 124.5 -0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 103.0454545455 6.451158515 115.7688650321 90.3220440588
129S1/SvImJ 2 107.9 6.7660321315 121.2444254973 94.5555745027
A/J 1 143.7 9.5686144038 162.5718675204 124.8281324796
A/J 2 142.4 9.5686144038 161.2718675204 123.5281324796
BALB/cJ 1 112.9 4.7843072019 122.3359337602 103.4640662398
BALB/cJ 2 113.3333333333 6.1765140387 125.5150714364 101.1515952303
BTBR T+ Itpr3tf/J 1 134.7 6.7660321315 148.0444254973 121.3555745027
BTBR T+ Itpr3tf/J 2 127.6666666667 5.5244421018 138.5623444597 116.7709888736
C3H/HeJ 1 104.375 10.6980361287 125.474389319 83.275610681
C3H/HeJ 2 129.1 6.7660321315 142.4444254973 115.7555745027
C57BL/6J 1 133.3571428571 8.0869551752 149.3067819867 117.4075037276
C57BL/6J 2 110.8333333333 12.3530280774 135.1968095395 86.4698571272
CAST/EiJ 1 143.5 12.3530280774 167.8634762061 119.1365237939
CAST/EiJ 2 121.25 15.129307784 151.0890425327 91.4109574673
DBA/2J 1 131.7142857143 8.0869551752 147.6639248438 115.7646465847
DBA/2J 2 132.0454545455 6.451158515 144.7688650321 119.3220440588
FVB/NJ 1 109.7105263158 4.9085956189 119.3915900855 100.0294625461
FVB/NJ 2 102.1764705882 5.1893097583 112.411177741 91.9417634355
LP/J 1 111.5952380952 4.6690057473 120.8037665402 102.3867096503
LP/J 2 112.3181818182 4.5616579325 121.3149916531 103.3213719832


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 105.4727272727 4.6743084245 114.6917140157 96.2537405298
A/J both 143.05 6.7660321315 156.3944254973 129.7055745027
BALB/cJ both 113.1166666667 3.9063704725 120.8210743197 105.4122590136
BTBR T+ Itpr3tf/J both 131.1833333333 4.3674549609 139.7971229527 122.569543714
C3H/HeJ both 116.7375 6.329043526 129.2200670586 104.2549329414
C57BL/6J both 122.0952380952 7.382346285 136.6551999874 107.535276203
CAST/EiJ both 132.375 9.7659261812 151.6360191327 113.1139808673
DBA/2J both 131.8798701299 5.1724339095 142.081293594 121.6784466658
FVB/NJ both 105.943498452 3.5715279194 112.9875070092 98.8994898948
LP/J both 111.9567099567 3.2637531219 118.3937042733 105.5197156401




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA