Project measure / variable:   Project1194   OF_stereotypic_episode_count__25_30min_

ID, description, units MPD:129327   OF_stereotypic_episode_count__25_30min_   OF_stereotypic_episode_count__25_30min_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
Ontology mappings


  STRAIN COMPARISON PLOT
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Project1194 - OF_stereotypic_episode_count__25_30min_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means33.496   None 33.365   None
Median of the strain means32.9   None 32.661   None
SD of the strain means± 7.8459 ± 9.7868
Coefficient of variation (CV)0.2342 0.2933
Min–max range of strain means20.286   –   47.368   None 22.824   –   54.65   None
Mean sample size per strain10.3   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.3857 0.3857 0.0052 0.9427
strain 9 16730.5928 1858.9548 24.9556 < 0.0001
sex:strain 9 2163.3092 240.3677 3.2268 0.0012
Residuals 183 13631.7419 74.4904


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 47.368 7.1586   19 1.6423 0.1511 30.0, 59.0 1.77
C57BL/6J m 54.65 11.197   17 2.7156 0.2049 40.0, 81.0 2.17
GAIA/NachJ f 38.7 8.9075   10 2.8168 0.2302 21.0, 53.0 0.66
GAIA/NachJ m 31.867 8.6261   15 2.2272 0.2707 18.0, 49.0 -0.15
GAIC/NachJ f 41.0 2.8284   2   2.0 0.069 39.0, 43.0 0.96
GAIC/NachJ m 38.0 5.6569   2   4.0 0.1489 34.0, 42.0 0.47
MANB/NachJ f 29.9 7.1872   10 2.2728 0.2404 15.0, 38.0 -0.46
MANB/NachJ m 26.375 8.4166   8 2.9757 0.3191 15.0, 42.0 -0.71
MANE/NachJ f 32.8 9.1488   5 4.0915 0.2789 19.0, 40.0 -0.09
MANE/NachJ m 24.5 12.942   6 5.2836 0.5283 5.0, 41.0 -0.91
MANF/NachJ f 29.4 8.6231   20 1.9282 0.2933 13.0, 47.0 -0.52
MANF/NachJ m 24.231 5.9323   13 1.6453 0.2448 14.0, 35.0 -0.93
SARA/NachJ f 33.0 7.8102   3 4.5092 0.2367 28.0, 42.0 -0.06
SARA/NachJ m 37.75 5.203   8 1.8395 0.1378 27.0, 43.0 0.45
SARB/NachJ f 36.875 9.8769   8 3.492 0.2678 18.0, 51.0 0.43
SARB/NachJ m 33.455 13.254   11 3.9963 0.3962 0.01
SARC/NachJ f 25.632 6.5592   19 1.5048 0.2559 19.0, 43.0 -1.0
SARC/NachJ m 22.824 8.698   17 2.1096 0.3811 8.0, 38.0 -1.08
TUCB/NachJ f 20.286 5.2509   7 1.9846 0.2588 12.0, 27.0 -1.68
TUCB/NachJ m 40.0 4.3589   3 2.5166 0.109 35.0, 43.0 0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 29.9 2.7292928202 35.2849272542 24.5150727458
129S1/SvImJ 2 26.375 3.0514421383 32.3955316971 20.3544683029
A/J 1 32.8 3.859802922 40.4154371553 25.1845628447
A/J 2 24.5 3.5235018799 31.451911192 17.548088808
BALB/cJ 1 29.4 1.929901461 33.2077185776 25.5922814224
BALB/cJ 2 24.2307692308 2.393748155 28.9536628624 19.5078755991
BTBR T+ Itpr3tf/J 1 38.7 2.7292928202 44.0849272542 33.3150727458
BTBR T+ Itpr3tf/J 2 31.8666666667 2.2284582561 36.2634413583 27.4698919751
C3H/HeJ 1 33.0 4.9829841456 42.8314870921 23.1685129079
C3H/HeJ 2 37.75 3.0514421383 43.7705316971 31.7294683029
C57BL/6J 1 20.2857142857 3.262128862 26.7219333991 13.8494951723
C57BL/6J 2 40.0 4.9829841456 49.8314870921 30.1685129079
CAST/EiJ 1 41.0 6.1028842765 53.0410633942 28.9589366058
CAST/EiJ 2 38.0 6.1028842765 50.0410633942 25.9589366058
DBA/2J 1 36.875 3.0514421383 42.8955316971 30.8544683029
DBA/2J 2 33.4545454545 2.6022785992 38.5888721372 28.3202187719
FVB/NJ 1 25.6315789474 1.9800371207 29.5382157788 21.7249421159
FVB/NJ 2 22.8235294118 2.0932720374 26.9535800832 18.6934787403
LP/J 1 47.3684210526 1.9800371207 51.2750578841 43.4617842212
LP/J 2 54.6470588235 2.0932720374 58.777109495 50.5170081521


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 28.1375 2.0469696152 32.1761954406 24.0988045594
A/J both 28.65 2.6130989311 33.8056753265 23.4943246735
BALB/cJ both 26.8153846154 1.5374125893 29.8487179725 23.7820512582
BTBR T+ Itpr3tf/J both 35.2833333333 1.7617509399 38.7592889293 31.8073777373
C3H/HeJ both 35.375 2.9215334209 41.1392202499 29.6107797501
C57BL/6J both 30.1428571429 2.9779026053 36.0182944653 24.2674198204
CAST/EiJ both 39.5 4.3153908567 48.0143175788 30.9856824212
DBA/2J both 35.1647727273 2.0051903295 39.1210371396 31.208508315
FVB/NJ both 24.2275541796 1.440688622 27.0700499967 21.3850583624
LP/J both 51.0077399381 1.440688622 53.8502357552 48.1652441209




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA