Project measure / variable:   Project1194   lightdark_total_distance_y_axis__centroid__dark__cm

ID, description, units MPD:129118   lightdark_total_distance_y_axis__centroid__dark__cm   lightdark_total_distance_y_axis__centroid__dark__cm    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
Ontology mappings


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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_total_distance_y_axis__centroid__dark__cm



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means181.9   None 146.0   None
Median of the strain means166.6   None 140.9   None
SD of the strain means± 74.47 ± 40.767
Coefficient of variation (CV)0.4094 0.2791
Min–max range of strain means88.87   –   320.3   None 95.87   –   221.2   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 50722.9842 50722.9842 5.1639 0.0242
strain 9 416397.9602 46266.44 4.7102 < 0.0001
sex:strain 9 143648.1028 15960.9003 1.6249 0.1104
Residuals 194 1905594.3497 9822.6513


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 118.2 28.222   21 6.1586 0.2387 69.69, 161.3 -0.86
C57BL/6J m 101.2 39.065   22 8.3287 0.3859 25.4, 164.3 -1.1
GAIA/NachJ f 175.5 49.313   10 15.594 0.2809 115.1, 255.1 -0.09
GAIA/NachJ m 171.2 60.2   15 15.543 0.3516 82.87, 324.8 0.62
GAIC/NachJ f 213.4 87.21   3 50.35 0.4086 115.9, 283.9 0.42
GAIC/NachJ m 221.2 39.881   2   28.2 0.1803 193.0, 249.4 1.84
MANB/NachJ f 320.3 382.9   11 115.4 1.1953 144.6, 1465.0 1.86
MANB/NachJ m 186.2 81.95   10 25.915 0.4402 89.06, 336.9 0.98
MANE/NachJ f 170.5 27.184   5 12.157 0.1595 148.8, 212.2 -0.15
MANE/NachJ m 171.4 65.38   5 29.237 0.3815 99.53, 277.3 0.62
MANF/NachJ f 140.5 37.998   20 8.4966 0.2705 68.11, 218.1 -0.56
MANF/NachJ m 139.6 43.015   12 12.417 0.3081 49.69, 198.9 -0.16
SARA/NachJ f 294.1 82.83   4 41.414 0.2816 185.6, 374.2 1.51
SARA/NachJ m 114.8 54.22   10 17.145 0.4723 57.31, 208.8 -0.77
SARB/NachJ f 88.87 36.891   7 13.943 0.4151 39.53, 138.6 -1.25
SARB/NachJ m 95.87 19.841   11 5.9824 0.207 61.76, 123.0 -1.23
SARC/NachJ f 162.7 48.012   19 11.015 0.2951 75.25, 234.9 -0.26
SARC/NachJ m 142.3 63.79   17 15.471 0.4483 57.78, 250.7 -0.09
TUCB/NachJ f 134.9 28.018   7 10.59 0.2077 93.5, 166.2 -0.63
TUCB/NachJ m 116.7 42.856   3 24.743 0.3672 68.11, 149.1 -0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 320.3 29.8825751703 379.2364327982 261.3635672018
129S1/SvImJ 2 186.176 31.3411092447 247.9890521984 124.3629478016
A/J 1 170.46 44.3230217536 257.8768567506 83.0431432494
A/J 2 171.386 44.3230217536 258.8028567506 83.9691432494
BALB/cJ 1 140.471 22.1615108768 184.1794283753 96.7625716247
BALB/cJ 2 139.5933333333 28.6103875176 196.0206717288 83.1659949378
BTBR T+ Itpr3tf/J 1 175.55 31.3411092447 237.3630521984 113.7369478016
BTBR T+ Itpr3tf/J 2 171.228 25.5899085408 221.6981457767 120.7578542233
C3H/HeJ 1 294.15 49.5546448047 391.8850170369 196.4149829631
C3H/HeJ 2 114.792 31.3411092447 176.6050521984 52.9789478016
C57BL/6J 1 134.9285714286 37.4597904175 208.8092998464 61.0478430108
C57BL/6J 2 116.7033333333 57.2207750351 229.5580101243 3.8486565423
CAST/EiJ 1 213.4333333333 57.2207750351 326.2880101243 100.5786565423
CAST/EiJ 2 221.2 70.0808507613 359.4181866123 82.9818133877
DBA/2J 1 88.8742857143 37.4597904175 162.7550141321 14.9935572965
DBA/2J 2 95.8690909091 29.8825751703 154.8055237073 36.9326581109
FVB/NJ 1 162.7115789474 22.7372304091 207.5554802641 117.8676776306
FVB/NJ 2 142.2852941176 24.0375335023 189.6937410076 94.8768472277
LP/J 1 118.2128571429 21.6274200813 160.8679155828 75.5577987029
LP/J 2 101.2413636364 21.1301715422 142.9157149269 59.5670123458


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 253.238 21.6519827469 295.9415025878 210.5344974122
A/J both 170.923 31.3411092447 232.7360521984 109.1099478016
BALB/cJ both 140.0321666667 18.0947978591 175.7199489928 104.3443843405
BTBR T+ Itpr3tf/J both 173.389 20.230599026 213.2891536238 133.4888463762
C3H/HeJ both 204.471 29.3169232288 262.2918158393 146.6501841607
C57BL/6J both 125.815952381 34.1959536851 193.2595215798 58.3723831821
CAST/EiJ both 217.3166666667 45.2369946478 306.5361224821 128.0972108513
DBA/2J both 92.3716883117 23.9593624546 139.6259609823 45.1174156411
FVB/NJ both 152.4984365325 16.5437651666 185.1271674373 119.8697056277
LP/J both 109.7271103896 15.1181137115 139.5440752167 79.9101455625




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA