Project measure / variable:   Project1194   lightdark_rest_time__whole_body__dark__s

ID, description, units MPD:129068   lightdark_rest_time__whole_body__dark__s   lightdark_rest_time__whole_body__dark__s    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_rest_time__whole_body__dark__s



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means46.567   None 47.531   None
Median of the strain means44.103   None 47.954   None
SD of the strain means± 16.062 ± 15.073
Coefficient of variation (CV)0.3449 0.3171
Min–max range of strain means27.84   –   73.96   None 25.985   –   70.23   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 186.4302 186.4302 0.4298 0.5128
strain 9 31573.1072 3508.123 8.0886 < 0.0001
sex:strain 9 1715.7926 190.6436 0.4396 0.9123
Residuals 194 84139.8395 433.7105


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 31.877 16.967   21 3.7024 0.5323 10.27, 75.9 -0.91
C57BL/6J m 28.584 18.762   22 4.0002 0.6564 9.89, 81.12 -1.26
GAIA/NachJ f 43.892 12.719   10 4.0221 0.2898 25.365, 65.14 -0.17
GAIA/NachJ m 54.4 16.084   15 4.153 0.2957 37.3, 98.17 0.46
GAIC/NachJ f 70.6 21.934   3 12.663 0.3107 56.82, 95.89 1.5
GAIC/NachJ m 70.23 29.617   2   20.943 0.4217 49.285, 91.17 1.51
MANB/NachJ f 53.38 21.494   11 6.4806 0.4027 19.47, 91.02 0.42
MANB/NachJ m 53.58 22.282   10 7.0462 0.4159 22.92, 101.4 0.4
MANE/NachJ f 30.759 5.5103   5 2.4643 0.1791 23.66, 38.7 -0.98
MANE/NachJ m 38.066 19.046   5 8.5175 0.5003 15.36, 58.26 -0.63
MANF/NachJ f 51.96 12.366   20 2.7651 0.238 29.165, 70.78 0.34
MANF/NachJ m 60.93 13.067   12 3.7722 0.2145 37.935, 75.97 0.89
SARA/NachJ f 27.84 9.8484   4 4.9242 0.3537 16.505, 40.505 -1.17
SARA/NachJ m 25.985 11.886   10 3.7588 0.4574 16.035, 52.77 -1.43
SARB/NachJ f 37.089 17.224   7 6.51 0.4644 22.605, 74.25 -0.59
SARB/NachJ m 38.202 8.7014   11 2.6236 0.2278 21.365, 51.73 -0.62
SARC/NachJ f 44.313 26.057   19 5.9778 0.588 13.67, 103.9 -0.14
SARC/NachJ m 42.329 41.233   17 10.001 0.9741 16.23, 195.6 -0.35
TUCB/NachJ f 73.96 29.128   7 11.009 0.3938 45.37, 117.0 1.71
TUCB/NachJ m 63.0 2.6207   3 1.5131 0.0416 60.53, 65.75 1.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 53.3754545455 6.2791901118 65.759697334 40.991211757
129S1/SvImJ 2 53.577 6.5856701486 66.5657034145 40.5882965855
A/J 1 30.759 9.3135440415 49.1278005264 12.3901994736
A/J 2 38.066 9.3135440415 56.4348005264 19.6971994736
BALB/cJ 1 51.95975 4.6567720208 61.1441502632 42.7753497368
BALB/cJ 2 60.92625 6.0118668278 72.7832597547 49.0692402453
BTBR T+ Itpr3tf/J 1 43.892 6.5856701486 56.8807034145 30.9032965855
BTBR T+ Itpr3tf/J 2 54.3966666667 5.3771771595 65.0018985953 43.7914347381
C3H/HeJ 1 27.84 10.4128587941 48.3769433211 7.3030566789
C3H/HeJ 2 25.985 6.5856701486 38.9737034145 12.9962965855
C57BL/6J 1 73.9578571429 7.8713813733 89.482327062 58.4333872237
C57BL/6J 2 63.0033333333 12.0237336557 86.7173528428 39.2893138238
CAST/EiJ 1 70.5966666667 12.0237336557 94.3106861762 46.8826471572
CAST/EiJ 2 70.2275 14.7260061298 99.2711237743 41.1838762257
DBA/2J 1 37.0892857143 7.8713813733 52.6137556334 21.5648157952
DBA/2J 2 38.2018181818 6.2791901118 50.5860609703 25.8175753933
FVB/NJ 1 44.3126315789 4.7777472839 53.7356274259 34.889635732
FVB/NJ 2 42.3288235294 5.0509784321 52.2907042988 32.36694276
LP/J 1 31.8769047619 4.5445441548 40.8399616487 22.9138478751
LP/J 2 28.5838636364 4.4400579084 37.340845692 19.8268815808


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 53.4762272727 4.5497054786 62.449463671 44.5029908745
A/J both 34.4125 6.5856701486 47.4012034145 21.4237965855
BALB/cJ both 56.443 3.8022384331 63.9420314128 48.9439685872
BTBR T+ Itpr3tf/J both 49.1443333333 4.2510318016 57.5285053355 40.7601613312
C3H/HeJ both 26.9125 6.1603303396 39.0623195188 14.7626804812
C57BL/6J both 68.4805952381 7.1855552281 82.6524325181 54.3087579581
CAST/EiJ both 70.4120833333 9.5055960828 89.1596618653 51.6645048014
DBA/2J both 37.6455519481 5.0345524425 47.5750362715 27.7160676247
FVB/NJ both 43.3207275542 3.4763217713 50.1769641165 36.4644909918
LP/J both 30.2303841991 3.1767513203 36.4957876873 23.964980711




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA