Project measure / variable:   Project1124   Anaeroplasma_pre

ID, description, units MPD:114968   Anaeroplasma_pre   Anaeroplasma   [%]  pre  
cocaine study
Data set, strains Project1124   CC   44 strains     sex: both
Procedure 16S rRNA Sequencing
Ontology mappings

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  STRAIN COMPARISON PLOT
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Project1124 - Anaeroplasma pre



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested38 strains35 strains
Mean of the strain means1.3909   % 0.67314   %
Median of the strain means0.208   % 0.13352   %
SD of the strain means± 2.617 ± 1.9534
Coefficient of variation (CV)1.8815 2.9019
Min–max range of strain means0.0   –   12.361   % 0.0   –   11.499   %
Mean sample size per strain1.0   mice 1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/UncJ f 0.27559 0.0   1   0.0 0.0 0.27559, 0.27559 -0.43
CC002/UncJ f 0.0 0.0   1   0.0 None -0.53
CC002/UncJ m 0.0 0.0   1   0.0 None -0.34
CC003/UncJ m 0.0 0.0   1   0.0 None -0.34
CC004/TauUncJ f 0.63131 0.0   1   0.0 0.0 0.63131, 0.63131 -0.29
CC005/TauUncJ f 0.84881 0.0   1   0.0 0.0 0.84881, 0.84881 -0.21
CC005/TauUncJ m 0.0629 0.0   1   0.0 0.0 0.0629, 0.0629 -0.31
CC006/TauUncJ f 0.14065 0.0   1   0.0 0.0 0.14065, 0.14065 -0.48
CC006/TauUncJ m 0.1079 0.0   1   0.0 0.0 0.1079, 0.1079 -0.29
CC007/UncJ f 0.0 0.0   1   0.0 None -0.53
CC008/GeniUncJ f 0.0 0.0   1   0.0 None -0.53
CC008/GeniUncJ m 0.0 0.0   1   0.0 None -0.34
CC009/UncJ f 0.05995 0.0   1   0.0 0.0 0.05995, 0.05995 -0.51
CC009/UncJ m 0.0 0.0   1   0.0 None -0.34
CC010/GeniUncJ m 1.0017 0.0   1   0.0 0.0 1.0017, 1.0017 0.17
CC011/UncJ f 0.01408 0.0   1   0.0 0.0 0.01408, 0.01408 -0.53
CC011/UncJ m 0.07124 0.0   1   0.0 0.0 0.07124, 0.07124 -0.31
CC012/GeniUncJ f 5.166 0.0   1   0.0 0.0 5.166, 5.166 1.44
CC012/GeniUncJ m 1.6891 0.0   1   0.0 0.0 1.6891, 1.6891 0.52
CC013/GeniUncJ f 4.0302 0.0   1   0.0 0.0 4.0302, 4.0302 1.01
CC013/GeniUncJ m 1.3148 0.0   1   0.0 0.0 1.3148, 1.3148 0.33
CC016/GeniUncJ f 0.02917 0.0   1   0.0 0.0 0.02917, 0.02917 -0.52
CC017/UncJ m 0.26173 0.0   1   0.0 0.0 0.26173, 0.26173 -0.21
CC018/UncJ f 0.14565 0.0   1   0.0 0.0 0.14565, 0.14565 -0.48
CC018/UncJ m 0.07455 0.0   1   0.0 0.0 0.07455, 0.07455 -0.31
CC019/TauUncJ m 2.0465 0.0   1   0.0 0.0 2.0465, 2.0465 0.7
CC020/GeniUncJ f 3.1186 0.0   1   0.0 0.0 3.1186, 3.1186 0.66
CC020/GeniUncJ m 11.499 0.0   1   0.0 0.0 11.499, 11.499 5.54
CC023/GeniUncJ f 0.20819 0.0   1   0.0 0.0 0.20819, 0.20819 -0.45
CC023/GeniUncJ m 0.15778 0.0   1   0.0 0.0 0.15778, 0.15778 -0.26
CC024/GeniUncJ m 0.00246378 0.0   1   0.0 0.0 0.00246378, 0.00246378 -0.34
CC026/GeniUncJ f 0.29013 0.0   1   0.0 0.0 0.29013, 0.29013 -0.42
CC026/GeniUncJ m 0.03005 0.0   1   0.0 0.0 0.03005, 0.03005 -0.33
CC027/GeniUncJ f 0.0 0.0   1   0.0 None -0.53
CC027/GeniUncJ m 0.31447 0.0   1   0.0 0.0 0.31447, 0.31447 -0.18
CC028/GeniUncJ f 8.1587 0.0   1   0.0 0.0 8.1587, 8.1587 2.59
CC028/GeniUncJ m 0.23056 0.0   1   0.0 0.0 0.23056, 0.23056 -0.23
CC029/UncJ m 0.13352 0.0   1   0.0 0.0 0.13352, 0.13352 -0.28
CC030/GeniUncJ f 0.72236 0.0   1   0.0 0.0 0.72236, 0.72236 -0.26
CC030/GeniUncJ m 1.2961 0.0   1   0.0 0.0 1.2961, 1.2961 0.32
CC033/GeniUncJ f 0.00532992 0.0   1   0.0 0.0 0.00532992, 0.00532992 -0.53
CC033/GeniUncJ m 0.45977 0.0   1   0.0 0.0 0.45977, 0.45977 -0.11
CC035/UncJ f 0.0 0.0   1   0.0 None -0.53
CC035/UncJ m 0.0 0.0   1   0.0 None -0.34
CC036/UncJ f 0.78859 0.0   1   0.0 0.0 0.78859, 0.78859 -0.23
CC036/UncJ m 0.22724 0.0   1   0.0 0.0 0.22724, 0.22724 -0.23
CC040/TauUncJ f 0.2675 0.0   1   0.0 0.0 0.2675, 0.2675 -0.43
CC041/TauUncJ f 3.2855 0.0   1   0.0 0.0 3.2855, 3.2855 0.72
CC043/GeniUncJ f 1.0186 0.0   1   0.0 0.0 1.0186, 1.0186 -0.14
CC043/GeniUncJ m 0.00532283 0.0   1   0.0 0.0 0.00532283, 0.00532283 -0.34
CC044/UncJ f 0.06348 0.0   1   0.0 0.0 0.06348, 0.06348 -0.51
CC044/UncJ m 0.5753 0.0   1   0.0 0.0 0.5753, 0.5753 -0.05
CC045/GeniUncJ f 0.10491 0.0   1   0.0 0.0 0.10491, 0.10491 -0.49
CC045/GeniUncJ m 0.64409 0.0   1   0.0 0.0 0.64409, 0.64409 -0.01
CC057/UncJ f 1.3124 0.0   1   0.0 0.0 1.3124, 1.3124 -0.03
CC057/UncJ m 0.0 0.0   1   0.0 None -0.34
CC060/UncJ f 0.01431 0.0   1   0.0 0.0 0.01431, 0.01431 -0.53
CC060/UncJ m 0.55085 0.0   1   0.0 0.0 0.55085, 0.55085 -0.06
CC065/UncJ f 0.00440509 0.0   1   0.0 0.0 0.00440509, 0.00440509 -0.53
CC068/TauUncJ f 12.361 0.0   1   0.0 0.0 12.361, 12.361 4.19
CC068/TauUncJ m 0.48713 0.0   1   0.0 0.0 0.48713, 0.48713 -0.1
CC074/UncJ f 2.2144 0.0   1   0.0 0.0 2.2144, 2.2144 0.31
CC075/UncJ f 5.5149 0.0   1   0.0 0.0 5.5149, 5.5149 1.58
CC075/UncJ m 0.0 0.0   1   0.0 None -0.34
CC078/TauUncJ f 0.20782 0.0   1   0.0 0.0 0.20782, 0.20782 -0.45
CC078/TauUncJ m 0.26968 0.0   1   0.0 0.0 0.26968, 0.26968 -0.21
CC079/TauUncJ f 0.00975641 0.0   1   0.0 0.0 0.00975641, 0.00975641 -0.53
CC079/TauUncJ m 0.00443754 0.0   1   0.0 0.0 0.00443754, 0.00443754 -0.34
CC080/TauUncJ f 0.0 0.0   1   0.0 None -0.53
CC080/TauUncJ m 0.0 0.0   1   0.0 None -0.34
CC083/UncJ f 0.0 0.0   1   0.0 None -0.53
CC083/UncJ m 0.04174 0.0   1   0.0 0.0 0.04174, 0.04174 -0.32
CC084/TauJ f 1.8431 0.0   1   0.0 0.0 1.8431, 1.8431 0.17




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA