Project measure / variable:   Bennett4   Y_fine_night_HP

ID, description, units MPD:114897   Y_fine_night_HP   activity on y-axis fine movement (beam breaks), night   [n]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis fine movement (beam breaks), night HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means450.1   n
Median of the strain means430.9   n
SD of the strain means± 165.0
Coefficient of variation (CV)0.3665
Min–max range of strain means241.5   –   1099.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 2836648.3911 135078.4948 9.717 < 0.0001
Residuals 78 1084293.6865 13901.2011


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 436.7 45.861   5 20.51 0.105 402.1, 505.3 -0.08
CC002/Unc f 309.2 45.954   5 20.551 0.1486 275.8, 383.5 -0.85
CC004/TauUnc f 1099.0 372.5   5 166.6 0.3388 800.0, 1658.0 3.93
CC006/TauUnc f 566.4 37.577   4 18.788 0.0663 525.2, 601.7 0.7
CC008/GeniUnc f 449.1 109.8   4 54.88 0.2444 291.5, 533.0 -0.01
CC011/Unc f 397.7 135.8   5 60.73 0.3414 222.1, 585.2 -0.32
CC012/GeniUnc f 301.5 15.931   5 7.1245 0.0528 279.6, 321.7 -0.9
CC019/TauUnc f 386.1 29.101   5 13.014 0.0754 344.0, 422.8 -0.39
CC024/GeniUnc f 487.4 82.66   2   58.45 0.1696 429.0, 545.9 0.23
CC027/GeniUnc f 591.7 109.6   5 49.009 0.1852 516.8, 782.3 0.86
CC028/GeniUnc f 388.8 20.196   4 10.098 0.0519 368.1, 414.8 -0.37
CC030/GeniUnc f 241.5 160.7   5 71.88 0.6654 23.0, 438.8 -1.26
CC032/GeniUnc f 383.4 55.04   5 24.612 0.1436 335.1, 471.9 -0.4
CC035/Unc f 416.3 92.79   5 41.499 0.2229 291.9, 515.6 -0.2
CC036/Unc f 476.0 65.2   4 32.601 0.137 383.5, 527.1 0.16
CC037/TauUnc f 433.7 56.81   5 25.405 0.131 364.4, 496.6 -0.1
CC040/TauUnc f 443.0 76.56   5 34.238 0.1728 341.4, 548.0 -0.04
CC041/TauUnc f 350.1 87.99   5 39.353 0.2513 246.6, 474.3 -0.61
CC045/GeniUnc f 467.9 62.18   4 31.091 0.1329 388.1, 528.2 0.11
CC059/TauUnc f 409.6 72.35   5 32.357 0.1766 306.8, 476.2 -0.25
CC063/Unc f 439.2 34.599   3 19.976 0.0788 401.4, 469.3 -0.07
CC071/TauUnc f 428.2 135.0   5 60.39 0.3153 192.8, 538.2 -0.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 436.66 52.7279832897 541.6333509766 331.6866490234
CC002/Unc f 309.24 52.7279832897 414.2133509766 204.2666490234
CC004/TauUnc f 1099.44 52.7279832897 1204.4133509766 994.4666490234
CC006/TauUnc f 566.4 58.9516774761 683.7637743048 449.0362256952
CC008/GeniUnc f 449.125 58.9516774761 566.4887743048 331.7612256952
CC011/Unc f 397.74 52.7279832897 502.7133509766 292.7666490234
CC012/GeniUnc f 301.54 52.7279832897 406.5133509766 196.5666490234
CC019/TauUnc f 386.08 52.7279832897 491.0533509766 281.1066490234
CC024/GeniUnc f 487.45 83.3702618113 653.4274413531 321.4725586469
CC027/GeniUnc f 591.7 52.7279832897 696.6733509766 486.7266490234
CC028/GeniUnc f 388.8 58.9516774761 506.1637743048 271.4362256952
CC030/GeniUnc f 241.52 52.7279832897 346.4933509766 136.5466490234
CC032/GeniUnc f 383.38 52.7279832897 488.3533509766 278.4066490234
CC035/Unc f 416.32 52.7279832897 521.2933509766 311.3466490234
CC036/Unc f 476.0 58.9516774761 593.3637743048 358.6362256952
CC037/TauUnc f 433.7 52.7279832897 538.6733509766 328.7266490234
CC040/TauUnc f 443.02 52.7279832897 547.9933509766 338.0466490234
CC041/TauUnc f 350.14 52.7279832897 455.1133509766 245.1666490234
CC045/GeniUnc f 467.85 58.9516774761 585.2137743048 350.4862256952
CC059/TauUnc f 409.64 52.7279832897 514.6133509766 304.6666490234
CC063/Unc f 439.2 68.07153372 574.720013376 303.679986624
CC071/TauUnc f 428.2 52.7279832897 533.1733509766 323.2266490234




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA