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Project measure / variable:   Bennett4   Y_amb_night_HFHS

ID, description, units MPD:114892   Y_amb_night_HFHS   activity on y-axis ambulatory movement (beam breaks), night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Bennett4 - activity on y-axis ambulatory movement (beam breaks), night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means948.3   n
Median of the strain means849.1   n
SD of the strain means± 514.3
Coefficient of variation (CV)0.5424
Min–max range of strain means483.4   –   2548.0   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 24625531.5852 1172644.3612 2.094 0.0104
Residuals 76 42559164.3112 559989.0041


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 483.4 136.6   5 61.11 0.2827 364.4, 713.1 -0.9
CC002/Unc f 651.3 263.4   5 117.8 0.4045 413.1, 1101.0 -0.58
CC004/TauUnc f 2143.0 1434.0   5 641.2 0.6691 932.0, 4563.0 2.32
CC006/TauUnc f 996.3 224.1   4 112.1 0.2249 710.5, 1256.0 0.09
CC008/GeniUnc f 576.4 94.66   4 47.33 0.1642 490.9, 673.4 -0.72
CC011/Unc f 1003.0 651.6   5 291.4 0.6494 356.5, 2103.0 0.11
CC012/GeniUnc f 498.1 136.4   4 68.2 0.2739 392.8, 698.5 -0.88
CC019/TauUnc f 657.8 40.926   5 18.302 0.0622 606.0, 712.5 -0.56
CC024/GeniUnc f 1060.0 68.59   2   48.5 0.0647 1011.0, 1108.0 0.22
CC027/GeniUnc f 1393.0 284.4   5 127.2 0.2041 1021.0, 1777.0 0.86
CC028/GeniUnc f 597.6 106.0   4 53.02 0.1774 494.8, 704.2 -0.68
CC030/GeniUnc f 687.6 204.5   5 91.46 0.2974 571.2, 1052.0 -0.51
CC032/GeniUnc f 807.8 262.9   5 117.6 0.3254 600.0, 1242.0 -0.27
CC035/Unc f 632.2 177.4   5 79.33 0.2806 474.2, 895.9 -0.61
CC036/Unc f 1027.0 280.9   5 125.6 0.2734 683.5, 1358.0 0.15
CC037/TauUnc f 921.2 248.7   5 111.2 0.27 506.8, 1173.0 -0.05
CC040/TauUnc f 890.5 209.5   4 104.8 0.2353 631.5, 1130.0 -0.11
CC041/TauUnc f 561.9 250.7   5 112.1 0.4461 313.6, 903.8 -0.75
CC045/GeniUnc f 2548.0 3156.0   4 1578.0 1.2384 849.8, 7279.0 3.11
CC059/TauUnc f 608.8 185.4   5 82.89 0.3044 289.0, 734.5 -0.66
CC063/Unc f 1143.0 149.9   3 86.53 0.1311 996.5, 1296.0 0.38
CC071/TauUnc f 974.2 189.5   4 94.74 0.1945 743.7, 1170.0 0.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 483.38 334.6607249422 1149.9145993913 -183.1545993913
CC002/Unc f 651.26 334.6607249422 1317.7945993913 -15.2745993913
CC004/TauUnc f 2143.0 334.6607249422 2809.5345993913 1476.4654006087
CC006/TauUnc f 996.325 374.1620651851 1741.5333367972 251.1166632028
CC008/GeniUnc f 576.4 374.1620651851 1321.6083367972 -168.8083367972
CC011/Unc f 1003.36 334.6607249422 1669.8945993913 336.8254006087
CC012/GeniUnc f 498.05 374.1620651851 1243.2583367972 -247.1583367972
CC019/TauUnc f 657.84 334.6607249422 1324.3745993913 -8.6945993913
CC024/GeniUnc f 1059.5 529.1450671103 2113.3837366922 5.6162633079
CC027/GeniUnc f 1393.2 334.6607249422 2059.7345993913 726.6654006087
CC028/GeniUnc f 597.6 374.1620651851 1342.8083367972 -147.6083367972
CC030/GeniUnc f 687.64 334.6607249422 1354.1745993913 21.1054006087
CC032/GeniUnc f 807.78 334.6607249422 1474.3145993913 141.2454006087
CC035/Unc f 632.2 334.6607249422 1298.7345993913 -34.3345993913
CC036/Unc f 1027.2 334.6607249422 1693.7345993913 360.6654006087
CC037/TauUnc f 921.18 334.6607249422 1587.7145993913 254.6454006087
CC040/TauUnc f 890.5 374.1620651851 1635.7083367972 145.2916632028
CC041/TauUnc f 561.88 334.6607249422 1228.4145993913 -104.6545993913
CC045/GeniUnc f 2548.225 374.1620651851 3293.4333367972 1803.0166632028
CC059/TauUnc f 608.84 334.6607249422 1275.3745993913 -57.6945993913
CC063/Unc f 1142.8333333333 432.0451381103 2003.3258010378 282.3408656289
CC071/TauUnc f 974.225 374.1620651851 1719.4333367972 229.0166632028




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA