Project measure / variable:   Bennett4   X_fine_ave_HFHS

ID, description, units MPD:114882   X_fine_ave_HFHS   activity on x-axis fine movement (beam breaks), average for day and night   [n]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - activity on x-axis fine movement (beam breaks), average for day and night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means325.5   n
Median of the strain means292.0   n
SD of the strain means± 73.29
Coefficient of variation (CV)0.2252
Min–max range of strain means248.1   –   511.6   n
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 483219.4135 23010.4483 1.6567 0.0581
Residuals 76 1055586.26 13889.2929


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 318.0 50.87   5 22.749 0.1599 266.3, 389.4 -0.1
CC002/Unc f 284.6 34.779   5 15.554 0.1222 240.6, 322.7 -0.56
CC004/TauUnc f 416.8 104.4   5 46.706 0.2506 281.4, 573.6 1.25
CC006/TauUnc f 293.1 159.7   4 79.87 0.545 57.82, 398.5 -0.44
CC008/GeniUnc f 289.1 116.8   4 58.39 0.4039 118.3, 377.4 -0.5
CC011/Unc f 345.4 74.89   5 33.494 0.2168 269.0, 464.0 0.27
CC012/GeniUnc f 259.1 31.757   4 15.879 0.1226 224.9, 292.6 -0.91
CC019/TauUnc f 271.7 40.999   5 18.335 0.1509 210.4, 323.7 -0.73
CC024/GeniUnc f 404.8 26.163   2   18.5 0.0646 386.3, 423.3 1.08
CC027/GeniUnc f 476.0 30.691   5 13.725 0.0645 450.1, 516.4 2.05
CC028/GeniUnc f 283.6 90.78   4 45.388 0.3201 156.7, 372.4 -0.57
CC030/GeniUnc f 288.5 39.486   5 17.659 0.1369 221.1, 316.4 -0.5
CC032/GeniUnc f 322.8 45.248   5 20.236 0.1402 253.3, 362.9 -0.04
CC035/Unc f 290.9 102.3   5 45.728 0.3515 153.5, 426.4 -0.47
CC036/Unc f 331.7 92.83   5 41.515 0.2799 177.3, 421.3 0.08
CC037/TauUnc f 280.0 165.2   5 73.87 0.5899 89.76, 415.5 -0.62
CC040/TauUnc f 330.4 64.12   4 32.062 0.1941 236.7, 381.4 0.07
CC041/TauUnc f 248.1 126.7   5 56.67 0.5108 75.53, 398.0 -1.06
CC045/GeniUnc f 511.6 387.8   4 193.9 0.758 263.6, 1090.0 2.54
CC059/TauUnc f 260.5 131.3   5 58.7 0.5039 78.26, 372.5 -0.89
CC063/Unc f 248.4 75.8   3 43.763 0.3052 165.0, 313.1 -1.05
CC071/TauUnc f 406.0 57.55   4 28.775 0.1417 342.3, 458.6 1.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 318.04 52.7053942106 423.0118900298 213.0681099702
CC002/Unc f 284.62 52.7053942106 389.5918900298 179.6481099702
CC004/TauUnc f 416.76 52.7053942106 521.7318900298 311.7881099702
CC006/TauUnc f 293.13 58.9264221179 410.4921409166 175.7678590834
CC008/GeniUnc f 289.15 58.9264221179 406.5121409166 171.7878590834
CC011/Unc f 345.4 52.7053942106 450.3718900298 240.4281099702
CC012/GeniUnc f 259.1 58.9264221179 376.4621409166 141.7378590834
CC019/TauUnc f 271.72 52.7053942106 376.6918900298 166.7481099702
CC024/GeniUnc f 404.8 83.3345453413 570.7751313934 238.8248686066
CC027/GeniUnc f 475.98 52.7053942106 580.9518900298 371.0081099702
CC028/GeniUnc f 283.6 58.9264221179 400.9621409166 166.2378590834
CC030/GeniUnc f 288.48 52.7053942106 393.4518900298 183.5081099702
CC032/GeniUnc f 322.8 52.7053942106 427.7718900298 217.8281099702
CC035/Unc f 290.88 52.7053942106 395.8518900298 185.9081099702
CC036/Unc f 331.7 52.7053942106 436.6718900298 226.7281099702
CC037/TauUnc f 280.032 52.7053942106 385.0038900298 175.0601099702
CC040/TauUnc f 330.425 58.9264221179 447.7871409166 213.0628590834
CC041/TauUnc f 248.086 52.7053942106 353.0578900298 143.1141099702
CC045/GeniUnc f 511.6 58.9264221179 628.9621409166 394.2378590834
CC059/TauUnc f 260.492 52.7053942106 365.4638900298 155.5201099702
CC063/Unc f 248.4 68.0423713443 383.9181273017 112.8818726983
CC071/TauUnc f 406.0 58.9264221179 523.3621409166 288.6378590834




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA