Project measure / variable:   Bennett4   RER_night_HFHS

ID, description, units MPD:114838   RER_night_HFHS   respiratory exchange ratio (VCO2/O2), night   [ratio]  HFHS group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Bennett4 - respiratory exchange ratio (VCO2/O2), night HFHS group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means0.85937   ratio
Median of the strain means0.85806   ratio
SD of the strain means± 0.04577
Coefficient of variation (CV)0.0533
Min–max range of strain means0.7723   –   0.94396   ratio
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 0.1933 0.0092 3.9675 < 0.0001
Residuals 76 0.1763 0.0023


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 0.7723 0.0361   5 0.01614 0.0467 0.73547, 0.81882 -1.9
CC002/Unc f 0.92139 0.03582   5 0.01602 0.0389 0.89406, 0.98294 1.36
CC004/TauUnc f 0.83949 0.01564   5 0.00699444 0.0186 0.81688, 0.85482 -0.43
CC006/TauUnc f 0.84103 0.06014   4 0.03007 0.0715 0.75271, 0.88729 -0.4
CC008/GeniUnc f 0.8244 0.06014   4 0.03007 0.073 0.77153, 0.91094 -0.76
CC011/Unc f 0.84239 0.06784   5 0.03034 0.0805 0.75871, 0.91359 -0.37
CC012/GeniUnc f 0.83792 0.01712   4 0.00856063 0.0204 0.82082, 0.86082 -0.47
CC019/TauUnc f 0.94396 0.0298   5 0.01333 0.0316 0.89553, 0.97571 1.85
CC024/GeniUnc f 0.91985 0.02267   2   0.01603 0.0246 0.90382, 0.93588 1.32
CC027/GeniUnc f 0.86139 0.0364   5 0.01628 0.0423 0.80782, 0.88994 0.04
CC028/GeniUnc f 0.87919 0.05764   4 0.02882 0.0656 0.84465, 0.96541 0.43
CC030/GeniUnc f 0.84275 0.06421   5 0.02872 0.0762 0.77671, 0.93265 -0.36
CC032/GeniUnc f 0.88948 0.07485   5 0.03347 0.0841 0.80459, 0.99529 0.66
CC035/Unc f 0.85473 0.02739   5 0.01225 0.032 0.823, 0.89429 -0.1
CC036/Unc f 0.89712 0.03972   5 0.01776 0.0443 0.84318, 0.93494 0.82
CC037/TauUnc f 0.80186 0.05512   5 0.02465 0.0687 0.73335, 0.87541 -1.26
CC040/TauUnc f 0.87213 0.04752   4 0.02376 0.0545 0.83365, 0.94053 0.28
CC041/TauUnc f 0.8016 0.07519   5 0.03363 0.0938 0.72853, 0.89665 -1.26
CC045/GeniUnc f 0.86447 0.04428   4 0.02214 0.0512 0.81112, 0.90324 0.11
CC059/TauUnc f 0.87127 0.0387   5 0.01731 0.0444 0.81847, 0.92524 0.26
CC063/Unc f 0.79668 0.01367   3 0.00788976 0.0172 0.78347, 0.81076 -1.37
CC071/TauUnc f 0.93084 0.0298   4 0.0149 0.032 0.89235, 0.96376 1.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 0.772304 0.0215401172 0.8152048615 0.7294031385
CC002/Unc f 0.921388 0.0215401172 0.9642888615 0.8784871385
CC004/TauUnc f 0.839494 0.0215401172 0.8823948615 0.7965931385
CC006/TauUnc f 0.84103 0.0240825832 0.8889946213 0.7930653787
CC008/GeniUnc f 0.8243975 0.0240825832 0.8723621213 0.7764328787
CC011/Unc f 0.84239 0.0215401172 0.8852908615 0.7994891385
CC012/GeniUnc f 0.837925 0.0240825832 0.8858896213 0.7899603787
CC019/TauUnc f 0.943964 0.0215401172 0.9868648615 0.9010631385
CC024/GeniUnc f 0.91985 0.0340579157 0.9876822179 0.8520177821
CC027/GeniUnc f 0.861388 0.0215401172 0.9042888615 0.8184871385
CC028/GeniUnc f 0.87919 0.0240825832 0.9271546213 0.8312253787
CC030/GeniUnc f 0.842752 0.0215401172 0.8856528615 0.7998511385
CC032/GeniUnc f 0.889482 0.0215401172 0.9323828615 0.8465811385
CC035/Unc f 0.854728 0.0215401172 0.8976288615 0.8118271385
CC036/Unc f 0.89712 0.0215401172 0.9400208615 0.8542191385
CC037/TauUnc f 0.801858 0.0215401172 0.8447588615 0.7589571385
CC040/TauUnc f 0.8721325 0.0240825832 0.9200971213 0.8241678787
CC041/TauUnc f 0.8016 0.0215401172 0.8445008615 0.7586991385
CC045/GeniUnc f 0.8644725 0.0240825832 0.9124371213 0.8165078787
CC059/TauUnc f 0.871272 0.0215401172 0.9141728615 0.8283711385
CC063/Unc f 0.7966833333 0.0278081717 0.8520681073 0.7412985593
CC071/TauUnc f 0.9308375 0.0240825832 0.9788021213 0.8828728787




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA