Project measure / variable:   Bennett4   TG_post_HP

ID, description, units MPD:114763   TG_post_HP   plasma triglyceride amount, post-diet   [mg/dL]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 17-20wks
Procedure lipid profile
Ontology mappings

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  STRAIN COMPARISON PLOT
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Bennett4 - plasma triglyceride amount, post-diet HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means104.9   mg/dL
Median of the strain means101.2   mg/dL
SD of the strain means± 38.533
Coefficient of variation (CV)0.3673
Min–max range of strain means66.32   –   255.0   mg/dL
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 130035.6196 6192.1724 8.796 < 0.0001
Residuals 78 54909.916 703.9733


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 130.8 27.869   5 12.464 0.2131 105.0, 168.0 0.67
CC002/Unc f 130.8 16.917   5 7.5657 0.1293 102.0, 147.0 0.67
CC004/TauUnc f 105.3 33.245   5 14.867 0.3157 75.0, 159.0 0.01
CC006/TauUnc f 78.75 12.816   4 6.408 0.1627 60.0, 87.0 -0.68
CC008/GeniUnc f 84.75 10.782   4 5.391 0.1272 75.0, 99.0 -0.52
CC011/Unc f 66.32 7.4035   5 3.311 0.1116 57.0, 73.6 -1.0
CC012/GeniUnc f 129.0 22.147   5 9.9045 0.1717 99.0, 153.0 0.63
CC019/TauUnc f 74.4 14.758   5 6.6 0.1984 57.0, 93.0 -0.79
CC024/GeniUnc f 78.0 16.971   2   12.0 0.2176 66.0, 90.0 -0.7
CC027/GeniUnc f 103.7 28.704   5 12.837 0.2767 69.0, 137.6 -0.03
CC028/GeniUnc f 102.8 19.691   4 9.8457 0.1916 76.5, 120.0 -0.05
CC030/GeniUnc f 111.6 30.989   5 13.859 0.2777 78.0, 162.0 0.17
CC032/GeniUnc f 91.5 9.0   5 4.0249 0.0984 78.0, 102.0 -0.35
CC035/Unc f 87.6 14.135   5 6.3214 0.1614 75.0, 111.0 -0.45
CC036/Unc f 255.0 65.18   4 32.588 0.2556 207.0, 351.0 3.9
CC037/TauUnc f 89.4 38.384   5 17.166 0.4293 51.0, 132.0 -0.4
CC040/TauUnc f 99.6 13.649   5 6.1041 0.137 84.0, 114.0 -0.14
CC041/TauUnc f 82.2 14.636   5 6.5452 0.178 60.0, 99.0 -0.59
CC045/GeniUnc f 110.2 53.07   4 26.534 0.4813 72.0, 186.0 0.14
CC059/TauUnc f 72.6 18.902   5 8.4534 0.2604 57.0, 102.0 -0.84
CC063/Unc f 109.0 22.517   3 13.0 0.2066 87.0, 132.0 0.11
CC071/TauUnc f 114.6 19.373   5 8.6637 0.169 93.0, 135.0 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 130.8 11.8656924117 154.4227789574 107.1772210426
CC002/Unc f 130.8 11.8656924117 154.4227789574 107.1772210426
CC004/TauUnc f 105.3 11.8656924117 128.9227789574 81.6772210426
CC006/TauUnc f 78.75 13.2662474164 105.161069783 52.338930217
CC008/GeniUnc f 84.75 13.2662474164 111.161069783 58.338930217
CC011/Unc f 66.32 11.8656924117 89.9427789574 42.6972210426
CC012/GeniUnc f 129.0 11.8656924117 152.6227789574 105.3772210426
CC019/TauUnc f 74.4 11.8656924117 98.0227789574 50.7772210426
CC024/GeniUnc f 78.0 18.7613070181 115.350893084 40.649106916
CC027/GeniUnc f 103.72 11.8656924117 127.3427789574 80.0972210426
CC028/GeniUnc f 102.75 13.2662474164 129.161069783 76.338930217
CC030/GeniUnc f 111.6 11.8656924117 135.2227789574 87.9772210426
CC032/GeniUnc f 91.5 11.8656924117 115.1227789574 67.8772210426
CC035/Unc f 87.6 11.8656924117 111.2227789574 63.9772210426
CC036/Unc f 255.0 13.2662474164 281.411069783 228.588930217
CC037/TauUnc f 89.4 11.8656924117 113.0227789574 65.7772210426
CC040/TauUnc f 99.6 11.8656924117 123.2227789574 75.9772210426
CC041/TauUnc f 82.2 11.8656924117 105.8227789574 58.5772210426
CC045/GeniUnc f 110.25 13.2662474164 136.661069783 83.838930217
CC059/TauUnc f 72.6 11.8656924117 96.2227789574 48.9772210426
CC063/Unc f 109.0 15.318543034 139.4968764977 78.5031235023
CC071/TauUnc f 114.6 11.8656924117 138.2227789574 90.9772210426




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA