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Project measure / variable:   Bennett4   TG_base_HP

ID, description, units MPD:114761   TG_base_HP   plasma triglyceride amount, baseline   [mg/dL]  HP group  
various diets 2 study
Data set, strains Bennett4   CC   22 strains     sex: f     age: 8-11wks
Procedure lipid profile
Ontology mappings

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  STRAIN COMPARISON PLOT
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Bennett4 - plasma triglyceride amount, baseline HP group



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means130.2   mg/dL
Median of the strain means121.3   mg/dL
SD of the strain means± 33.789
Coefficient of variation (CV)0.2595
Min–max range of strain means91.8   –   230.0   mg/dL
Mean sample size per strain4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 116821.5148 5562.9293 8.6802 < 0.0001
Residuals 79 50629.4175 640.8787


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc f 149.4 23.944   5 10.708 0.1603 129.0, 189.0 0.57
CC002/Unc f 193.6 16.456   5 7.3593 0.085 180.0, 222.0 1.88
CC004/TauUnc f 159.9 32.145   5 14.376 0.201 125.6, 195.0 0.88
CC006/TauUnc f 104.2 25.734   4 12.867 0.2469 72.0, 135.0 -0.77
CC008/GeniUnc f 142.8 31.532   4 15.766 0.2209 100.0, 174.0 0.37
CC011/Unc f 91.8 22.51   5 10.067 0.2452 60.0, 123.0 -1.14
CC012/GeniUnc f 121.8 29.44   5 13.166 0.2417 84.0, 165.0 -0.25
CC019/TauUnc f 91.8 11.345   5 5.0735 0.1236 81.0, 108.0 -1.14
CC024/GeniUnc f 115.5 19.092   2   13.5 0.1653 102.0, 129.0 -0.43
CC027/GeniUnc f 120.9 31.493   5 14.084 0.2605 69.0, 150.0 -0.27
CC028/GeniUnc f 127.1 15.75   4 7.875 0.1239 105.0, 141.0 -0.09
CC030/GeniUnc f 129.2 27.959   5 12.504 0.2164 84.0, 159.0 -0.03
CC032/GeniUnc f 109.8 12.478   5 5.5803 0.1136 99.0, 126.0 -0.6
CC035/Unc f 104.7 21.644   5 9.6794 0.2067 84.0, 138.0 -0.75
CC036/Unc f 230.0 43.721   5 19.552 0.1901 189.0, 288.0 2.95
CC037/TauUnc f 95.4 24.409   5 10.916 0.2559 69.0, 126.0 -1.03
CC040/TauUnc f 134.2 24.888   5 11.13 0.1854 96.0, 165.0 0.12
CC041/TauUnc f 102.9 16.418   5 7.3423 0.1596 87.0, 130.5 -0.81
CC045/GeniUnc f 166.2 28.418   4 14.209 0.1709 129.0, 193.0 1.07
CC059/TauUnc f 120.0 23.812   5 10.649 0.1984 93.0, 153.0 -0.3
CC063/Unc f 119.0 24.434   3 14.107 0.2053 102.0, 147.0 -0.33
CC071/TauUnc f 133.8 22.208   5 9.9318 0.166 99.0, 159.0 0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc f 149.4 11.3214725414 171.9348274002 126.8651725998
CC002/Unc f 193.6 11.3214725414 216.1348274002 171.0651725998
CC004/TauUnc f 159.92 11.3214725414 182.4548274002 137.3851725998
CC006/TauUnc f 104.25 12.657791104 129.444702964 79.055297036
CC008/GeniUnc f 142.75 12.657791104 167.944702964 117.555297036
CC011/Unc f 91.8 11.3214725414 114.3348274002 69.2651725998
CC012/GeniUnc f 121.8 11.3214725414 144.3348274002 99.2651725998
CC019/TauUnc f 91.8 11.3214725414 114.3348274002 69.2651725998
CC024/GeniUnc f 115.5 17.900819849 151.1306906317 79.8693093683
CC027/GeniUnc f 120.9 11.3214725414 143.4348274002 98.3651725998
CC028/GeniUnc f 127.125 12.657791104 152.319702964 101.930297036
CC030/GeniUnc f 129.2 11.3214725414 151.7348274002 106.6651725998
CC032/GeniUnc f 109.8 11.3214725414 132.3348274002 87.2651725998
CC035/Unc f 104.7 11.3214725414 127.2348274002 82.1651725998
CC036/Unc f 230.0 11.3214725414 252.5348274002 207.4651725998
CC037/TauUnc f 95.4 11.3214725414 117.9348274002 72.8651725998
CC040/TauUnc f 134.24 11.3214725414 156.7748274002 111.7051725998
CC041/TauUnc f 102.9 11.3214725414 125.4348274002 80.3651725998
CC045/GeniUnc f 166.25 12.657791104 191.444702964 141.055297036
CC059/TauUnc f 120.0 11.3214725414 142.5348274002 97.4651725998
CC063/Unc f 119.0 14.6159582025 148.0923370769 89.9076629231
CC071/TauUnc f 133.8 11.3214725414 156.3348274002 111.2651725998




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA