Project measure / variable:   Graham2   log_titer_d2

ID, description, units MPD:113790   log_titer_d2   lung viral load titer (log10(x+1)), post infection   [log(n)]  day 2  
SARS-CoV study
Data set, strains Graham2   CC RIX   105 strains     sex: f     age: 8-10wks
Procedure in vitro assay
Availability note:Individual animal data were not submitted. Some functionality not available.
Ontology mappings

  STRAIN COMPARISON PLOT
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Graham2 - lung viral load titer (log10(x+1)), post infection day 2



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested105 strains
Mean of the strain means6.3555   log(n)
Median of the strain means6.62   log(n)
SD of the strain means± 1.1387
Coefficient of variation (CV)0.1792
Min–max range of strain means0.0   –   7.68   log(n)
Mean sample size per strainNone   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 055) f 7.17 None   None None 0.72
RIX:CC(001 x 074) f 6.57 None   None None 0.19
RIX:CC(002 x 011) f 6.87 None   None None 0.45
RIX:CC(002 x 021) f 6.44 None   None None 0.07
RIX:CC(003 x 051) f 6.57 None   None None 0.19
RIX:CC(003 x 062) f 6.68 None   None None 0.28
RIX:CC(004 x 011) f 7.23 None   None None 0.77
RIX:CC(004 x 012) f 6.85 None   None None 0.43
RIX:CC(005 x 001) f 6.23 None   None None -0.11
RIX:CC(005 x 040) f 6.13 None   None None -0.2
RIX:CC(006 x 007) f 6.94 None   None None 0.51
RIX:CC(006 x 039) f 7.02 None   None None 0.58
RIX:CC(007 x 070) f 6.45 None   None None 0.08
RIX:CC(007 x 075) f 6.58 None   None None 0.2
RIX:CC(008 x 009) f 5.74 None   None None -0.54
RIX:CC(008 x 010) f 6.2 None   None None -0.14
RIX:CC(008 x 018) f 6.08 None   None None -0.24
RIX:CC(009 x 040) f 6.31 None   None None -0.04
RIX:CC(010 x 015) f 6.55 None   None None 0.17
RIX:CC(010 x 060) f 5.87 None   None None -0.43
RIX:CC(011 x 032) f 4.96 None   None None -1.23
RIX:CC(011 x 042) f 6.65 None   None None 0.26
RIX:CC(012 x 032) f 4.67 None   None None -1.48
RIX:CC(012 x 038) f 6.31 None   None None -0.04
RIX:CC(013 x 026) f 6.72 None   None None 0.32
RIX:CC(013 x 041) f 7.19 None   None None 0.73
RIX:CC(014 x 059) f 6.23 None   None None -0.11
RIX:CC(015 x 018) f 6.04 None   None None -0.28
RIX:CC(015 x 059) f 7.41 None   None None 0.93
RIX:CC(016 x 038) f 7.27 None   None None 0.8
RIX:CC(016 x 061) f 6.75 None   None None 0.35
RIX:CC(017 x 004) f 5.68 None   None None -0.59
RIX:CC(017 x 041) f 6.97 None   None None 0.54
RIX:CC(018 x 009) f 5.54 None   None None -0.72
RIX:CC(018 x 065) f 2.84 None   None None -3.09
RIX:CC(019 x 002) f 6.87 None   None None 0.45
RIX:CC(019 x 004) f 7.01 None   None None 0.57
RIX:CC(019 x 027) f 6.98 None   None None 0.55
RIX:CC(020 x 008) f 5.95 None   None None -0.36
RIX:CC(021 x 023) f 6.33 None   None None -0.02
RIX:CC(022 x 024) f 6.45 None   None None 0.08
RIX:CC(022 x 044) f 6.94 None   None None 0.51
RIX:CC(023 x 025) f 6.33 None   None None -0.02
RIX:CC(024 x 023) f 6.32 None   None None -0.03
RIX:CC(024 x 052) f 6.69 None   None None 0.29
RIX:CC(025 x 028) f 7.36 None   None None 0.88
RIX:CC(026 x 034) f 7.24 None   None None 0.78
RIX:CC(027 x 045) f 6.87 None   None None 0.45
RIX:CC(028 x 024) f 7.17 None   None None 0.72
RIX:CC(028 x 030) f 6.62 None   None None 0.23
RIX:CC(029 x 027) f 6.11 None   None None -0.22
RIX:CC(029 x 071) f 7.09 None   None None 0.65
RIX:CC(030 x 023) f 2.85 None   None None -3.08
RIX:CC(030 x 061) f 1.54 None   None None -4.23
RIX:CC(032 x 013) f 4.67 None   None None -1.48
RIX:CC(032 x 017) f 6.18 None   None None -0.15
RIX:CC(033 x 046) f 7.32 None   None None 0.85
RIX:CC(033 x 068) f 6.78 None   None None 0.37
RIX:CC(035 x 020) f 6.54 None   None None 0.16
RIX:CC(035 x 071) f 6.85 None   None None 0.43
RIX:CC(036 x 051) f 6.14 None   None None -0.19
RIX:CC(037 x 046) f 6.75 None   None None 0.35
RIX:CC(037 x 057) f 5.47 None   None None -0.78
RIX:CC(038 x 013) f 6.45 None   None None 0.08
RIX:CC(039 x 020) f 6.38 None   None None 0.02
RIX:CC(040 x 003) f 5.97 None   None None -0.34
RIX:CC(040 x 015) f 6.97 None   None None 0.54
RIX:CC(041 x 012) f 6.64 None   None None 0.25
RIX:CC(041 x 016) f 7.15 None   None None 0.7
RIX:CC(042 x 017) f 5.7 None   None None -0.58
RIX:CC(042 x 019) f 0.0 None   None None -5.58
RIX:CC(042 x 025) f 7.37 None   None None 0.89
RIX:CC(043 x 033) f 6.38 None   None None 0.02
RIX:CC(044 x 060) f 6.62 None   None None 0.23
RIX:CC(045 x 044) f 6.74 None   None None 0.34
RIX:CC(046 x 068) f 6.97 None   None None 0.54
RIX:CC(049 x 036) f 5.37 None   None None -0.87
RIX:CC(051 x 005) f 5.48 None   None None -0.77
RIX:CC(051 x 009) f 5.88 None   None None -0.42
RIX:CC(052 x 014) f 3.8 None   None None -2.24
RIX:CC(055 x 006) f 7.57 None   None None 1.07
RIX:CC(055 x 028) f 7.68 None   None None 1.16
RIX:CC(056 x 033) f 7.31 None   None None 0.84
RIX:CC(057 x 052) f 7.05 None   None None 0.61
RIX:CC(058 x 022) f 6.75 None   None None 0.35
RIX:CC(059 x 065) f 6.71 None   None None 0.31
RIX:CC(060 x 006) f 6.27 None   None None -0.08
RIX:CC(060 x 037) f 7.12 None   None None 0.67
RIX:CC(061 x 025) f 7.26 None   None None 0.79
RIX:CC(061 x 026) f 6.83 None   None None 0.42
RIX:CC(061 x 039) f 6.7 None   None None 0.3
RIX:CC(062 x 046) f 7.05 None   None None 0.61
RIX:CC(063 x 001) f 6.85 None   None None 0.43
RIX:CC(063 x 002) f 6.35 None   None None 0.0
RIX:CC(065 x 010) f 7.17 None   None None 0.72
RIX:CC(065 x 072) f 6.43 None   None None 0.07
RIX:CC(068 x 035) f 6.96 None   None None 0.53
RIX:CC(068 x 043) f 7.01 None   None None 0.57
RIX:CC(070 x 003) f 6.56 None   None None 0.18
RIX:CC(071 x 053) f 6.48 None   None None 0.11
RIX:CC(071 x 058) f 6.82 None   None None 0.41
RIX:CC(072 x 063) f 5.26 None   None None -0.96
RIX:CC(072 x 075) f 6.2 None   None None -0.14
RIX:CC(074 x 058) f 7.23 None   None None 0.77
RIX:CC(075 x 035) f 6.71 None   None None 0.31


GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA