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Project measure / variable:   CSNA03   antici_incorrect_cc_acq_Binghamton

ID, description, units MPD:112907   antici_incorrect_cc_acq_Binghamton   mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  acquisition  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), CC acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains18 strains
Mean of the strain means0.40247   n 0.53768   n
Median of the strain means0.33413   n 0.41304   n
SD of the strain means± 0.22143 ± 0.36568
Coefficient of variation (CV)0.5502 0.6801
Min–max range of strain means0.14308   –   0.93696   n 0.08495   –   1.3919   n
Mean sample size per strain3.9   mice 3.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.2213 0.2213 0.8313 0.3641
strain 15 6.4524 0.4302 1.6156 0.0825
sex:strain 15 3.597 0.2398 0.9007 0.5656
Residuals 101 26.8914 0.2663


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.37094 0.3531   7 0.13346 0.9519 0.05882, 1.0 -0.14
129S1/SvImJ m 0.51472 0.55096   4 0.27548 1.0704 0.08197, 1.2769 -0.06
A/J f 0.59849 0.58092   5 0.2598 0.9706 0.06897, 1.4675 0.89
A/J m 0.8865 0.82274   6 0.33588 0.9281 0.277, 2.42 0.95
C57BL/6J f 0.26075 0.08719   5 0.03899 0.3344 0.1346, 0.38 -0.64
C57BL/6J m 0.15852 0.04082   5 0.01825 0.2575 0.107, 0.22 -1.04
CAST/EiJ f 0.18925 0.15577   6 0.06359 0.8231 0.0869, 0.484 -0.96
CAST/EiJ m 0.08495 0.06986   4 0.03493 0.8224 0.0123, 0.18 -1.24
CC002/UncJ f 0.2478 0.28164   3 0.16261 1.1366 0.058, 0.5714 -0.7
CC002/UncJ m 0.1889 0.0   1   0.0 0.0 0.1889, 0.1889 -0.95
CC004/TauUncJ f 0.58374 0.67448   4 0.33724 1.1555 0.09375, 1.534 0.82
CC004/TauUncJ m 0.41858 0.30648   6 0.12512 0.7322 0.108, 0.87898 -0.33
CC006/TauUncJ f 0.14308 0.11869   3 0.06853 0.8295 0.02344, 0.2608 -1.17
CC006/TauUncJ m 0.27467 0.11143   3 0.06434 0.4057 0.158, 0.38 -0.72
CC011/UncJ f 0.1678 0.15867   2   0.1122 0.9456 0.0556, 0.28 -1.06
CC011/UncJ m 0.40525 0.49604   2   0.35075 1.224 0.0545, 0.756 -0.36
CC012/GeniUncJ f 0.51359 0.40669   3 0.2348 0.7918 0.1, 0.913 0.5
CC012/GeniUncJ m 0.67177 0.69278   3 0.39998 1.0313 0.2597, 1.4716 0.37
CC025/GeniUncJ f 0.6818 0.0   1   0.0 0.0 0.6818, 0.6818 1.26
CC025/GeniUncJ m 1.2005 0.83368   2   0.5895 0.6944 0.611, 1.79 1.81
CC028/GeniUncJ f 0.28255 0.09228   2   0.06525 0.3266 0.2173, 0.3478 -0.54
CC028/GeniUncJ m 0.35377 0.11424   3 0.06596 0.3229 0.26, 0.481 -0.5
CC032/GeniUncJ f 0.181 0.04384   2   0.031 0.2422 0.15, 0.212 -1.0
CC032/GeniUncJ m 1.3919 2.126   3 1.2274 1.5274 0.1118, 3.846 2.34
CC041/TauUncJ f 0.45144 0.39199   6 0.16003 0.8683 0.04166, 1.0492 0.22
CC041/TauUncJ m 0.95879 0.57026   5 0.25503 0.5948 0.40677, 1.8626 1.15
CC061/GeniUncJ f 0.42627 0.1788   3 0.10323 0.4195 0.2428, 0.6 0.11
CC061/GeniUncJ m 0.68267 0.89847   3 0.51873 1.3161 0.15, 1.72 0.4
NOD/ShiLtJ f 0.66822 0.45   5 0.20125 0.6734 0.25, 1.3611 1.2
NOD/ShiLtJ m 0.52816 0.23332   5 0.10434 0.4418 0.2, 0.808 -0.03
NZO/HlLtJ f 0.93696 0.70062   6 0.28603 0.7478 0.27, 2.28 2.41
NZO/HlLtJ m 0.4075 0.20222   4 0.10111 0.4962 0.13, 0.6 -0.36
PWK/PhJ f 0.24345 0.21439   4 0.1072 0.8806 0.0613, 0.48 -0.72
PWK/PhJ m 0.22023 0.12958   6 0.0529 0.5884 0.07216, 0.41463 -0.87
WSB/EiJ f 0.29731 0.18873   4 0.09437 0.6348 0.1, 0.54737 -0.47
WSB/EiJ m 0.33079 0.19883   4 0.09942 0.6011 0.13043, 0.60577 -0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.37094 0.1950279468 0.7578229845 -0.0159429845
129S1/SvImJ m 0.5147175 0.257997723 1.0265155818 0.0029194182
A/J f 0.598494 0.2307601787 1.0562601207 0.1407278793
A/J m 0.8865 0.2106542587 1.3043813839 0.4686186161
C57BL/6J f 0.26075 0.2307601787 0.7185161207 -0.1970161207
C57BL/6J m 0.158522 0.2307601787 0.6162881207 -0.2992441207
CAST/EiJ f 0.18925 0.2106542587 0.6071313839 -0.2286313839
CAST/EiJ m 0.08495 0.257997723 0.5967480818 -0.4268480818
CC004/TauUncJ f 0.5837375 0.257997723 1.0955355818 0.0719394182
CC004/TauUncJ m 0.4185816667 0.2106542587 0.8364630506 0.0007002828
CC006/TauUncJ f 0.14308 0.2979101096 0.7340535206 -0.4478935206
CC006/TauUncJ m 0.2746666667 0.2979101096 0.8656401872 -0.3163068539
CC011/UncJ f 0.1678 0.3648638789 0.8915917885 -0.5559917885
CC011/UncJ m 0.40525 0.3648638789 1.1290417885 -0.3185417885
CC012/GeniUncJ f 0.5135933333 0.2979101096 1.1045668539 -0.0773801872
CC012/GeniUncJ m 0.6717666667 0.2979101096 1.2627401872 0.0807931461
CC028/GeniUncJ f 0.28255 0.3648638789 1.0063417885 -0.4412417885
CC028/GeniUncJ m 0.3537666667 0.2979101096 0.9447401872 -0.2372068539
CC032/GeniUncJ f 0.181 0.3648638789 0.9047917885 -0.5427917885
CC032/GeniUncJ m 1.3918666667 0.2979101096 1.9828401872 0.8008931461
CC041/TauUncJ f 0.4514433333 0.2106542587 0.8693247172 0.0335619494
CC041/TauUncJ m 0.958794 0.2307601787 1.4165601207 0.5010278793
CC061/GeniUncJ f 0.4262666667 0.2979101096 1.0172401872 -0.1647068539
CC061/GeniUncJ m 0.6826666667 0.2979101096 1.2736401872 0.0916931461
NOD/ShiLtJ f 0.66822 0.2307601787 1.1259861207 0.2104538793
NOD/ShiLtJ m 0.528156 0.2307601787 0.9859221207 0.0703898793
NZO/HlLtJ f 0.9369633333 0.2106542587 1.3548447172 0.5190819494
NZO/HlLtJ m 0.4075 0.257997723 0.9192980818 -0.1042980818
PWK/PhJ f 0.24345 0.257997723 0.7552480818 -0.2683480818
PWK/PhJ m 0.2202266667 0.2106542587 0.6381080506 -0.1976547172
WSB/EiJ f 0.297315 0.257997723 0.8091130818 -0.2144830818
WSB/EiJ m 0.3307925 0.257997723 0.8425905818 -0.1810055818


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.44282875 0.1617086308 0.7636151744 0.1220423256
A/J both 0.742497 0.1562253795 1.0524061287 0.4325878713
C57BL/6J both 0.209636 0.1631720872 0.5333255281 -0.1140535281
CAST/EiJ both 0.1371 0.1665368141 0.4674642412 -0.1932642412
CC004/TauUncJ both 0.5011595833 0.1665368141 0.8315238246 0.1707953421
CC006/TauUncJ both 0.2088733333 0.2106542587 0.6267547172 -0.2090080506
CC011/UncJ both 0.286525 0.257997723 0.7983230818 -0.2252730818
CC012/GeniUncJ both 0.59268 0.2106542587 1.0105613839 0.1747986161
CC028/GeniUncJ both 0.3181583333 0.2355186211 0.7853639238 -0.1490472571
CC032/GeniUncJ both 0.7864333333 0.2355186211 1.2536389238 0.3192277429
CC041/TauUncJ both 0.7051186667 0.1562253795 1.0150277954 0.395209538
CC061/GeniUncJ both 0.5544666667 0.2106542587 0.9723480506 0.1365852828
NOD/ShiLtJ both 0.598188 0.1631720872 0.9218775281 0.2744984719
NZO/HlLtJ both 0.6722316667 0.1665368141 1.0025959079 0.3418674254
PWK/PhJ both 0.2318383333 0.1665368141 0.5622025746 -0.0985259079
WSB/EiJ both 0.31405375 0.1824319395 0.6759496442 -0.0478421442




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA