Project measure / variable:   CSNA03   pct_omit_cc_rev_Binghamton

ID, description, units MPD:112900   pct_omit_cc_rev_Binghamton   percentage of responses considered omissions (reversal learning assay), CC   [%]  reversal  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses considered omissions (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested17 strains18 strains
Mean of the strain means32.347   % 20.839   %
Median of the strain means18.467   % 17.023   %
SD of the strain means± 38.414 ± 15.548
Coefficient of variation (CV)1.1876 0.7461
Min–max range of strain means3.5365   –   145.3   % 2.3999   –   60.65   %
Mean sample size per strain4.3   mice 3.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 150.8886 150.8886 0.1256 0.7237
strain 15 33886.4934 2259.0996 1.8808 0.0336
sex:strain 15 29607.014 1973.8009 1.6433 0.0752
Residuals 102 122516.894 1201.146


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 18.467 16.715   7 6.3177 0.9052 1.7857, 51.0 -0.36
129S1/SvImJ m 60.65 89.32   5 39.943 1.4728 6.3291, 219.0 2.56
A/J f 65.03 51.55   6 21.046 0.7927 4.878, 132.7 0.85
A/J m 29.991 26.788   4 13.394 0.8932 4.7945, 67.86 0.59
C57BL/6J f 14.853 9.612   5 4.2986 0.6471 1.1494, 28.205 -0.46
C57BL/6J m 52.08 62.17   6 25.381 1.1939 0.65789, 161.5 2.01
CAST/EiJ f 26.156 17.33   7 6.5501 0.6625 5.0, 56.67 -0.16
CAST/EiJ m 15.882 14.155   4 7.0777 0.8913 2.2727, 32.653 -0.32
CC002/UncJ f 145.3 193.8   2   137.1 1.3337 8.2707, 282.4 2.94
CC002/UncJ m 21.924 21.418   2   15.145 0.9769 6.7797, 37.069 0.07
CC004/TauUncJ f 7.5814 1.0703   4 0.53515 0.1412 6.278, 8.5714 -0.64
CC004/TauUncJ m 24.012 22.002   7 8.3158 0.9163 4.8, 61.36 0.2
CC006/TauUncJ f 3.5365 2.9012   3 1.675 0.8204 1.4925, 6.8571 -0.75
CC006/TauUncJ m 10.494 9.7351   3 5.6205 0.9277 3.5533, 21.622 -0.67
CC011/UncJ f 106.3 131.0   3 75.64 1.2329 3.5714, 253.8 1.93
CC011/UncJ m 7.2165 0.0   1   0.0 0.0 7.2165, 7.2165 -0.88
CC012/GeniUncJ f 24.757 24.222   3 13.984 0.9784 4.8387, 51.72 -0.2
CC012/GeniUncJ m 13.509 11.661   2   8.2454 0.8632 5.2632, 21.754 -0.47
CC025/GeniUncJ m 14.064 18.186   2   12.859 1.2931 1.2048, 26.923 -0.44
CC028/GeniUncJ f 13.7 15.368   3 8.8724 1.1217 3.4783, 31.373 -0.49
CC028/GeniUncJ m 2.4519 1.4253   3 0.82289 0.5813 0.81301, 3.4014 -1.18
CC032/GeniUncJ f 14.163 4.5318   2   3.2045 0.32 10.959, 17.368 -0.47
CC032/GeniUncJ m 18.163 13.72   3 7.9212 0.7554 3.5714, 30.802 -0.17
CC041/TauUncJ f 21.558 7.7669   4 3.8834 0.3603 15.0, 31.783 -0.28
CC041/TauUncJ m 18.788 15.07   5 6.7396 0.8021 2.1277, 37.209 -0.13
CC061/GeniUncJ f 10.363 3.2323   3 1.8662 0.3119 6.6667, 12.658 -0.57
CC061/GeniUncJ m 30.56 25.054   2   17.716 0.8198 12.844, 48.276 0.63
NOD/ShiLtJ f 14.063 8.8321   5 3.9498 0.6281 2.381, 23.529 -0.48
NOD/ShiLtJ m 11.816 8.9153   5 3.987 0.7545 2.4845, 24.603 -0.58
NZO/HlLtJ f 30.319 18.667   7 7.0554 0.6157 5.4348, 58.06 -0.05
NZO/HlLtJ m 29.804 26.263   4 13.132 0.8812 4.0541, 64.36 0.58
PWK/PhJ f 7.3594 5.1979   4 2.599 0.7063 0.81967, 13.235 -0.65
PWK/PhJ m 2.3999 0.60394   5 0.27009 0.2517 1.5873, 3.0769 -1.19
WSB/EiJ f 26.385 18.041   5 8.0682 0.6838 4.7945, 53.03 -0.16
WSB/EiJ m 11.292 7.0773   4 3.5387 0.6268 2.5641, 19.88 -0.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 18.4667285714 13.09932397 44.4491755563 -7.5157184135
129S1/SvImJ m 60.64562 15.4993291423 91.3884658646 29.9027741354
A/J f 65.0326666667 14.1488869957 93.0969169365 36.9684163968
A/J m 29.990625 17.3287767839 64.3621715875 -4.3809215875
C57BL/6J f 14.85348 15.4993291423 45.5963258646 -15.8893658646
C57BL/6J m 52.0750316667 14.1488869957 80.1392819365 24.0107813968
CAST/EiJ f 26.1562571429 13.09932397 52.1387041278 0.173810158
CAST/EiJ m 15.882175 17.3287767839 50.2537215875 -18.4893715875
CC002/UncJ f 145.33535 24.5065911471 193.9440573438 96.7266426562
CC002/UncJ m 21.92435 24.5065911471 70.5330573438 -26.6843573438
CC004/TauUncJ f 7.5814 17.3287767839 41.9529465875 -26.7901465875
CC004/TauUncJ m 24.0118 13.09932397 49.9942469849 -1.9706469849
CC006/TauUncJ f 3.5365 20.0095478818 43.2253433495 -36.1523433495
CC006/TauUncJ m 10.4938666667 20.0095478818 50.1827100162 -29.1949766828
CC012/GeniUncJ f 24.7569 20.0095478818 64.4457433495 -14.9319433495
CC012/GeniUncJ m 13.5086 24.5065911471 62.1173073438 -35.1001073438
CC028/GeniUncJ f 13.7004333333 20.0095478818 53.3892766828 -25.9884100162
CC028/GeniUncJ m 2.4519366667 20.0095478818 42.1407800162 -37.2369066828
CC032/GeniUncJ f 14.1635 24.5065911471 62.7722073438 -34.4452073438
CC032/GeniUncJ m 18.1628 20.0095478818 57.8516433495 -21.5260433495
CC041/TauUncJ f 21.55775 17.3287767839 55.9292965875 -12.8137965875
CC041/TauUncJ m 18.78754 15.4993291423 49.5303858646 -11.9553058646
CC061/GeniUncJ f 10.3632333333 20.0095478818 50.0520766828 -29.3256100162
CC061/GeniUncJ m 30.56 24.5065911471 79.1687073438 -18.0487073438
NOD/ShiLtJ f 14.0626 15.4993291423 44.8054458646 -16.6802458646
NOD/ShiLtJ m 11.81644 15.4993291423 42.5592858646 -18.9264058646
NZO/HlLtJ f 30.3194 13.09932397 56.3018469849 4.3369530151
NZO/HlLtJ m 29.804275 17.3287767839 64.1758215875 -4.5672715875
PWK/PhJ f 7.3594175 17.3287767839 41.7309640875 -27.0121290875
PWK/PhJ m 2.3999 15.4993291423 33.1427458646 -28.3429458646
WSB/EiJ f 26.3853 15.4993291423 57.1281458646 -4.3575458646
WSB/EiJ m 11.292025 17.3287767839 45.6635715875 -23.0795215875


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 39.5561742857 10.1466927165 59.682091179 19.4302573925
A/J both 47.5116458333 11.1856773157 69.6983837528 25.3249079139
C57BL/6J both 33.4642558333 10.4930954331 54.2772608726 12.651250794
CAST/EiJ both 21.0192160714 10.861385654 42.5627230175 -0.5242908746
CC002/UncJ both 83.62985 17.3287767839 118.0013965875 49.2583034125
CC004/TauUncJ both 15.7966 10.861385654 37.3401069461 -5.7469069461
CC006/TauUncJ both 7.0151833333 14.1488869957 35.0794336032 -21.0490669365
CC012/GeniUncJ both 19.13275 15.8189365642 50.5095356705 -12.2440356705
CC028/GeniUncJ both 8.076185 14.1488869957 36.1404352699 -19.9880652699
CC032/GeniUncJ both 16.16315 15.8189365642 47.5399356705 -15.2136356705
CC041/TauUncJ both 20.172645 11.6244968567 43.2297793984 -2.8844893984
CC061/GeniUncJ both 20.4616166667 15.8189365642 51.8384023372 -10.9151690038
NOD/ShiLtJ both 12.93952 10.9596807403 34.6779947838 -8.7989547838
NZO/HlLtJ both 30.0618375 10.861385654 51.6053444461 8.5183305539
PWK/PhJ both 4.87965875 11.6244968567 27.9367931484 -18.1774756484
WSB/EiJ both 18.8386625 11.6244968567 41.8957968984 -4.2184718984




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA