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Project measure / variable:   CSNA03   pct_correct_cc_rev_Binghamton

ID, description, units MPD:112898   pct_correct_cc_rev_Binghamton   percentage of responses that are correct (reversal learning assay), CC   [%]  reversal  
Data set, strains CSNA03   CC w/par   18 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses that are correct (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested17 strains18 strains
Mean of the strain means50.7   % 48.494   %
Median of the strain means51.13   % 44.681   %
SD of the strain means± 5.5981 ± 12.503
Coefficient of variation (CV)0.1104 0.2578
Min–max range of strain means41.377   –   59.35   % 35.048   –   91.81   %
Mean sample size per strain4.5   mice 4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 61.1922 61.1922 0.1801 0.6721
strain 16 8402.7852 525.1741 1.5458 0.096
sex:strain 16 6154.8122 384.6758 1.1323 0.3347
Residuals 113 38391.1097 339.7443


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 42.153 7.5636   7 2.8588 0.1794 26.289, 49.0 -1.53
129S1/SvImJ m 39.839 14.033   5 6.2759 0.3523 18.672, 54.76 -0.69
A/J f 42.62 14.52   6 5.9278 0.3407 18.072, 57.14 -1.44
A/J m 48.614 21.127   5 9.4485 0.4346 33.188, 85.0 0.01
C57BL/6J f 47.594 7.9253   5 3.5443 0.1665 35.632, 56.41 -0.55
C57BL/6J m 43.623 7.0759   6 2.8887 0.1622 35.338, 51.97 -0.39
CAST/EiJ f 58.82 17.64   7 6.6674 0.2999 35.0, 90.0 1.45
CAST/EiJ m 44.177 8.6464   4 4.3232 0.1957 32.941, 53.41 -0.35
CC002/UncJ f 50.11 1.7522   2   1.239 0.035 48.872, 51.35 -0.1
CC002/UncJ m 37.394 0.14991   2   0.106 0.004 37.288, 37.5 -0.89
CC004/TauUncJ f 56.74 17.132   4 8.5662 0.3019 33.632, 75.0 1.08
CC004/TauUncJ m 57.22 19.674   7 7.4361 0.3438 34.351, 85.0 0.7
CC006/TauUncJ f 41.377 4.0434   3 2.3345 0.0977 37.143, 45.198 -1.66
CC006/TauUncJ m 35.048 10.254   3 5.9203 0.2926 25.225, 45.685 -1.08
CC011/UncJ f 53.41 25.407   3 14.669 0.4757 25.146, 74.36 0.48
CC011/UncJ m 54.3 0.98288   2   0.695 0.0181 53.61, 55.0 0.46
CC012/GeniUncJ f 51.13 14.686   3 8.4789 0.2872 35.424, 64.52 0.08
CC012/GeniUncJ m 44.758 7.0872   3 4.0918 0.1583 37.895, 52.05 -0.3
CC025/GeniUncJ m 56.67 6.8801   2   4.865 0.1214 51.81, 61.54 0.65
CC028/GeniUncJ f 46.395 5.5451   3 3.2015 0.1195 40.87, 51.96 -0.77
CC028/GeniUncJ m 39.342 11.155   3 6.4404 0.2835 28.796, 51.02 -0.73
CC032/GeniUncJ f 53.39 1.9021   2   1.345 0.0356 52.05, 54.74 0.48
CC032/GeniUncJ m 43.903 3.3642   3 1.9423 0.0766 40.23, 46.835 -0.37
CC041/TauUncJ f 47.452 5.2493   6 2.143 0.1106 41.071, 56.25 -0.58
CC041/TauUncJ m 51.94 6.9748   5 3.1192 0.1343 45.349, 61.7 0.28
CC061/GeniUncJ f 57.3 14.573   3 8.4137 0.2543 40.506, 66.67 1.18
CC061/GeniUncJ m 44.603 16.798   3 9.6981 0.3766 25.688, 57.78 -0.31
NOD/ShiLtJ f 51.75 16.603   5 7.4251 0.3209 32.069, 69.05 0.19
NOD/ShiLtJ m 91.81 72.32   5 32.341 0.7877 46.584, 219.3 3.46
NZO/HlLtJ f 59.35 14.253   7 5.3873 0.2402 38.583, 85.0 1.55
NZO/HlLtJ m 42.7 7.927   4 3.9635 0.1856 31.683, 50.57 -0.46
PWK/PhJ f 51.0 15.077   6 6.1552 0.2956 27.562, 72.92 0.05
PWK/PhJ m 47.063 4.3202   6 1.7637 0.0918 41.772, 53.97 -0.11
WSB/EiJ f 51.27 4.8206   5 2.1559 0.094 47.059, 58.87 0.1
WSB/EiJ m 49.893 6.9571   4 3.4786 0.1394 42.735, 57.83 0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 42.1531428571 6.9666997112 55.9554314948 28.3508542195
129S1/SvImJ m 39.8386 8.2431102632 56.169688154 23.507511846
A/J f 42.6205 7.5248957253 57.5286756176 27.7123243824
A/J m 48.6136 8.2431102632 64.944688154 32.282511846
C57BL/6J f 47.594 8.2431102632 63.925088154 31.262911846
C57BL/6J m 43.6231666667 7.5248957253 58.5313422842 28.7149910491
CAST/EiJ f 58.8247142857 6.9666997112 72.6270029234 45.022425648
CAST/EiJ m 44.177 9.2160774473 62.4357116294 25.9182883706
CC002/UncJ f 50.111 13.0335017178 75.9327176178 24.2892823822
CC002/UncJ m 37.394 13.0335017178 63.2157176178 11.5722823822
CC004/TauUncJ f 56.7405 9.2160774473 74.9992116294 38.4817883706
CC004/TauUncJ m 57.2221428571 6.9666997112 71.0244314948 43.4198542195
CC006/TauUncJ f 41.3773333333 10.6418095901 62.4606774819 20.2939891847
CC006/TauUncJ m 35.048 10.6418095901 56.1313441486 13.9646558514
CC011/UncJ f 53.4053333333 10.6418095901 74.4886774819 32.3219891847
CC011/UncJ m 54.305 13.0335017178 80.1267176178 28.4832823822
CC012/GeniUncJ f 51.1313333333 10.6418095901 72.2146774819 30.0479891847
CC012/GeniUncJ m 44.7583333333 10.6418095901 65.8416774819 23.6749891847
CC028/GeniUncJ f 46.3946666667 10.6418095901 67.4780108153 25.3113225181
CC028/GeniUncJ m 39.3423333333 10.6418095901 60.4256774819 18.2589891847
CC032/GeniUncJ f 53.395 13.0335017178 79.2167176178 27.5732823822
CC032/GeniUncJ m 43.9026666667 10.6418095901 64.9860108153 22.8193225181
CC041/TauUncJ f 47.4516666667 7.5248957253 62.3598422842 32.5434910491
CC041/TauUncJ m 51.9436 8.2431102632 68.274688154 35.612511846
CC061/GeniUncJ f 57.2953333333 10.6418095901 78.3786774819 36.2119891847
CC061/GeniUncJ m 44.6026666667 10.6418095901 65.6860108153 23.5193225181
NOD/ShiLtJ f 51.7464 8.2431102632 68.077488154 35.415311846
NOD/ShiLtJ m 91.812 8.2431102632 108.143088154 75.480911846
NZO/HlLtJ f 59.3461428571 6.9666997112 73.1484314948 45.5438542195
NZO/HlLtJ m 42.7 9.2160774473 60.9587116294 24.4412883706
PWK/PhJ f 50.9998333333 7.5248957253 65.9080089509 36.0916577158
PWK/PhJ m 47.0635 7.5248957253 61.9716756176 32.1553243824
WSB/EiJ f 51.271 8.2431102632 67.602088154 34.939911846
WSB/EiJ m 49.89325 9.2160774473 68.1519616294 31.6345383706


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 40.9958714286 5.3963823919 51.6870782352 30.3046646219
A/J both 45.61705 5.5806120293 56.673248946 34.560851054
C57BL/6J both 45.6085833333 5.5806120293 56.6647822794 34.5523843873
CAST/EiJ both 51.5008571429 5.7764822422 62.9451103077 40.056603978
CC002/UncJ both 43.7525 9.2160774473 62.0112116294 25.4937883706
CC004/TauUncJ both 56.9813214286 5.7764822422 68.4255745934 45.5370682637
CC006/TauUncJ both 38.2126666667 7.5248957253 53.1208422842 23.3044910491
CC011/UncJ both 53.8551666667 8.4130891827 70.5230137174 37.187319616
CC012/GeniUncJ both 47.9448333333 7.5248957253 62.8530089509 33.0366577158
CC028/GeniUncJ both 42.8685 7.5248957253 57.7766756176 27.9603243824
CC032/GeniUncJ both 48.6488333333 8.4130891827 65.316680384 31.9809862826
CC041/TauUncJ both 49.6976333333 5.5806120293 60.7538322794 38.6414343873
CC061/GeniUncJ both 50.949 7.5248957253 65.8571756176 36.0408243824
NOD/ShiLtJ both 71.7792 5.8287591652 83.3270231778 60.2313768222
NZO/HlLtJ both 51.0230714286 5.7764822422 62.4673245934 39.5788182637
PWK/PhJ both 49.0316666667 5.3209047951 59.573338741 38.4899945924
WSB/EiJ both 50.582125 6.1823326974 62.8304411155 38.3338088845




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA