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Project measure / variable:   CSNA03   antici_incorrect_do_acq_JAX

ID, description, units MPD:110545   antici_incorrect_do_acq_JAX   mean number of anticipatory nose pokes made in incorrect flanking hole without prior successful nose poke in central hole (reversal learning assay), DO   [n]  acquisition  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age:
Procedure operant conditioning chamber
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.57679   n 1.9357   n
Median of the strain means0.46739   n 0.43443   n
SD of the strain means± 0.31464 ± 4.4222
Coefficient of variation (CV)0.5455 2.2845
Min–max range of strain means0.32951   –   1.3457   n 0.13613   –   13.71   n
Mean sample size per strain31.9   mice 23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 28.08 28.08 1.3218 0.2509
strain 8 622.2303 77.7788 3.6611 0.0004
sex:strain 8 736.4097 92.0512 4.333 < 0.0001
Residuals 478 10154.8538 21.2445


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.35303 0.35655   3 0.20586 1.01 0.14286, 0.76471 -0.71
129S1/SvImJ m 0.33154 0.47579   4 0.2379 1.4351 -0.36
A/J f 1.3457 0.71148   6 0.29046 0.5287 0.15, 2.2133 2.44
A/J m 1.0536 0.51383   5 0.22979 0.4877 0.46154, 1.795 -0.2
C57BL/6J f 0.43861 0.3241   14 0.08662 0.7389 0.05, 0.93056 -0.44
C57BL/6J m 0.13613 0.08569   11 0.02584 0.6295 -0.41
CAST/EiJ f 0.40796 0.3267   10 0.10331 0.8008 0.12088, 0.99213 -0.54
CAST/EiJ m 0.43443 0.35211   8 0.12449 0.8105 -0.34
J:DO f 0.46739 0.36916   226 0.02456 0.7898 -0.35
J:DO m 0.47771 0.55716   154 0.0449 1.1663 -0.33
NOD/ShiLtJ f 0.725 0.96522   8 0.34126 1.3313 0.47
NOD/ShiLtJ m 0.39832 0.37835   11 0.11408 0.9499 -0.35
NZO/HlLtJ f 0.50051 0.62053   3 0.35826 1.2398 0.05, 1.2083 -0.24
NZO/HlLtJ m 0.41057 0.03424   2   0.02421 0.0834 0.38636, 0.43478 -0.34
PWK/PhJ f 0.32951 0.41353   9 0.13784 1.255 -0.79
PWK/PhJ m 13.71 37.898   8 13.399 2.7642 2.66
WSB/EiJ f 0.62342 0.65528   8 0.23168 1.0511 0.07576, 2.1438 0.15
WSB/EiJ m 0.46934 0.63367   6 0.2587 1.3501 0.05, 1.7313 -0.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.35303 2.6611065345 5.5819427357 -4.8758827357
129S1/SvImJ m 0.3315425 2.3045858611 4.8599137633 -4.1968287633
A/J f 1.3457166667 1.881686476 5.0431163203 -2.351682987
A/J m 1.05361 2.0612842581 5.1039083888 -2.9966883888
C57BL/6J f 0.4386092857 1.2318529586 2.859125541 -1.9819069696
C57BL/6J m 0.1361327273 1.3897175633 2.8668433439 -2.5945778894
CAST/EiJ f 0.407963 1.4575480769 3.2719564566 -2.4560304566
CAST/EiJ m 0.43443125 1.6295882902 3.636473278 -2.767610778
J:DO f 0.4673943805 0.3065975423 1.069839932 -0.1350511709
J:DO m 0.4777127273 0.3714176419 1.207525838 -0.2521003834
NOD/ShiLtJ f 0.725 1.6295882902 3.927042028 -2.477042028
NOD/ShiLtJ m 0.3983154545 1.3897175633 3.1290260712 -2.3323951621
NZO/HlLtJ f 0.5005133333 2.6611065345 5.729426069 -4.7283994024
NZO/HlLtJ m 0.41057 3.2591765804 6.814654056 -5.993514056
PWK/PhJ f 0.3295077778 1.536390574 3.3484219533 -2.6894063977
PWK/PhJ m 13.71019 1.6295882902 16.912232028 10.508147972
WSB/EiJ f 0.62342375 1.6295882902 3.825465778 -2.578618278
WSB/EiJ m 0.469345 1.881686476 4.1667446536 -3.2280546536


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.34228625 1.7601565256 3.8008869315 -3.1163144315
A/J both 1.1996633333 1.3954960397 3.9417283051 -1.5424016384
C57BL/6J both 0.2873710065 0.9285441047 2.1119037833 -1.5371617703
CAST/EiJ both 0.421197125 1.0931610577 2.5691922174 -1.7267979674
J:DO both 0.4725535539 0.2408075568 0.9457257792 -0.0006186714
NOD/ShiLtJ both 0.5616577273 1.0708493009 2.6658115727 -1.5424961182
NZO/HlLtJ both 0.4555416667 2.1037894363 4.5893601494 -3.6782768161
PWK/PhJ both 7.0198488889 1.1198274411 9.2202418054 4.8194559724
WSB/EiJ both 0.546384375 1.2446186152 2.9919843703 -1.8992156203




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA