Project measure / variable:   CSNA03   antici_resp_left_cc_rev_JAX

ID, description, units MPD:110510   antici_resp_left_cc_rev_JAX   total number of anticipatory responses in left flanking hole without prior successful nose poke in central hole (reversal learning assay), CC   [n]  reversal  
Data set, strains CSNA03   CC w/par   52 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - total number of anticipatory responses in left flanking hole without prior successful nose poke in central hole (reversal learning assay), CC reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested51 strains49 strains
Mean of the strain means129.8   n 169.7   n
Median of the strain means116.0   n 110.5   n
SD of the strain means± 86.18 ± 235.1
Coefficient of variation (CV)0.6638 1.3854
Min–max range of strain means3.0   –   472.5   n 17.0   –   1511.0   n
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 45.4568 45.4568 0.0021 0.9638
strain 33 1363255.4703 41310.7718 1.8766 0.0048
sex:strain 33 1123127.5927 34034.1695 1.5461 0.038
Residuals 189 4160500.1961 22013.2286


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 56.67 70.68   3 40.81 1.2474 4.0, 137.0 -0.85
129S1/SvImJ m 98.5 85.57   4 42.783 0.8687 24.0, 178.0 -0.3
A/J f 393.8 363.6   6 148.4 0.9231 111.0, 1096.0 3.06
A/J m 162.2 133.8   5 59.83 0.8248 80.0, 394.0 -0.03
C57BL/6J f 156.6 143.3   14 38.287 0.9145 6.0, 587.0 0.31
C57BL/6J m 171.8 213.8   11 64.47 1.2445 17.0, 601.0 0.01
CAST/EiJ f 71.5 77.42   10 24.482 1.0828 8.0, 265.0 -0.68
CAST/EiJ m 110.5 92.03   8 32.536 0.8328 2.0, 289.0 -0.25
CC001/UncJ f 152.7 116.2   3 67.11 0.7614 63.0, 284.0 0.27
CC001/UncJ m 139.0 0.0   1   0.0 0.0 139.0, 139.0 -0.13
CC002/UncJ f 108.8 51.89   4 25.947 0.4772 47.0, 174.0 -0.24
CC002/UncJ m 122.8 87.07   4 43.536 0.7093 45.0, 247.0 -0.2
CC003/UncJ f 472.5 603.2   2   426.5 1.2765 46.0, 899.0 3.98
CC003/UncJ m 172.3 125.4   3 72.42 0.7278 94.0, 317.0 0.01
CC004/TauUncJ f 167.0 0.0   1   0.0 0.0 167.0, 167.0 0.43
CC004/TauUncJ m 305.5 169.0   2   119.5 0.5532 186.0, 425.0 0.58
CC005/TauUncJ f 103.7 69.87   3 40.342 0.674 57.0, 184.0 -0.3
CC005/TauUncJ m 20.0 18.385   2   13.0 0.9192 7.0, 33.0 -0.64
CC006/TauUncJ f 34.5 19.092   2   13.5 0.5534 21.0, 48.0 -1.11
CC006/TauUncJ m 157.5 169.0   2   119.5 1.073 38.0, 277.0 -0.05
CC007/UncJ f 92.0 0.0   1   0.0 0.0 92.0, 92.0 -0.44
CC008/GeniUncJ f 3.0 0.0   1   0.0 0.0 3.0, 3.0 -1.47
CC008/GeniUncJ m 112.0 0.0   1   0.0 0.0 112.0, 112.0 -0.25
CC009/UncJ f 63.0 63.64   2   45.0 1.0102 18.0, 108.0 -0.78
CC009/UncJ m 33.0 4.2426   2   3.0 0.1286 30.0, 36.0 -0.58
CC011/UncJ f 124.3 99.43   3 57.41 0.7997 62.0, 239.0 -0.06
CC011/UncJ m 211.7 114.0   3 65.83 0.5387 122.0, 340.0 0.18
CC012/GeniUncJ f 92.67 27.934   3 16.128 0.3015 68.0, 123.0 -0.43
CC012/GeniUncJ m 52.0 0.0   1   0.0 0.0 52.0, 52.0 -0.5
CC013/GeniUncJ f 117.5 96.87   2   68.5 0.8245 49.0, 186.0 -0.14
CC013/GeniUncJ m 591.0 332.3   2   235.0 0.5623 356.0, 826.0 1.79
CC015/UncJ f 40.0 0.0   1   0.0 0.0 40.0, 40.0 -1.04
CC015/UncJ m 17.0 0.0   1   0.0 0.0 17.0, 17.0 -0.65
CC016/GeniUncJ f 103.0 112.9   3 65.2 1.0964 22.0, 232.0 -0.31
CC016/GeniUncJ m 64.0 66.52   4 33.259 1.0393 6.0, 139.0 -0.45
CC017/UncJ f 73.5 4.9497   2   3.5 0.0673 70.0, 77.0 -0.65
CC017/UncJ m 27.0 21.378   3 12.342 0.7918 10.0, 51.0 -0.61
CC018/UncJ f 228.7 64.61   3 37.302 0.2825 162.0, 291.0 1.15
CC018/UncJ m 50.0 52.33   2   37.0 1.0465 13.0, 87.0 -0.51
CC019/TauUncJ f 174.5 247.3   4 123.7 1.4173 21.0, 542.0 0.52
CC019/TauUncJ m 136.8 65.89   4 32.943 0.4818 40.0, 179.0 -0.14
CC023/GeniUncJ f 54.0 39.598   2   28.0 0.7333 26.0, 82.0 -0.88
CC023/GeniUncJ m 53.0 0.0   1   0.0 0.0 53.0, 53.0 -0.5
CC025/GeniUncJ f 132.0 86.97   3 50.21 0.6589 32.0, 190.0 0.03
CC025/GeniUncJ m 78.33 37.005   3 21.365 0.4724 55.0, 121.0 -0.39
CC026/GeniUncJ f 147.0 0.0   1   0.0 0.0 147.0, 147.0 0.2
CC026/GeniUncJ m 252.5 318.9   2   225.5 1.263 27.0, 478.0 0.35
CC027/GeniUncJ f 141.0 87.68   2   62.0 0.6219 79.0, 203.0 0.13
CC027/GeniUncJ m 137.5 156.8   4 78.39 1.1402 10.0, 350.0 -0.14
CC028/GeniUncJ f 49.0 48.775   3 28.16 0.9954 11.0, 104.0 -0.94
CC028/GeniUncJ m 129.3 69.01   3 39.843 0.5336 56.0, 193.0 -0.17
CC029/UncJ f 38.0 0.0   1   0.0 0.0 38.0, 38.0 -1.07
CC029/UncJ m 50.0 0.0   1   0.0 0.0 50.0, 50.0 -0.51
CC030/GeniUncJ f 56.0 33.941   2   24.0 0.6061 32.0, 80.0 -0.86
CC030/GeniUncJ m 191.5 103.9   2   73.5 0.5428 118.0, 265.0 0.09
CC032/GeniUncJ f 74.0 67.88   2   48.0 0.9173 26.0, 122.0 -0.65
CC033/GeniUncJ f 248.0 217.8   2   154.0 0.8782 94.0, 402.0 1.37
CC033/GeniUncJ m 86.5 7.7782   2   5.5 0.0899 81.0, 92.0 -0.35
CC035/UncJ m 79.0 0.0   1   0.0 0.0 79.0, 79.0 -0.39
CC036/UncJ f 96.0 43.486   3 25.106 0.453 67.0, 146.0 -0.39
CC036/UncJ m 114.7 25.502   3 14.723 0.2224 89.0, 140.0 -0.23
CC037/TauUncJ f 126.5 2.1213   2   1.5 0.0168 125.0, 128.0 -0.04
CC037/TauUncJ m 88.0 100.7   3 58.13 1.1441 5.0, 200.0 -0.35
CC040/TauUncJ f 64.0 64.09   3 37.005 1.0015 2.0, 130.0 -0.76
CC040/TauUncJ m 83.33 25.166   3 14.53 0.302 60.0, 110.0 -0.37
CC041/TauUncJ f 233.7 126.4   3 73.0 0.5411 149.0, 379.0 1.21
CC041/TauUncJ m 132.0 33.941   2   24.0 0.2571 108.0, 156.0 -0.16
CC043/GeniUncJ f 109.5 34.648   2   24.5 0.3164 85.0, 134.0 -0.24
CC043/GeniUncJ m 156.5 98.29   2   69.5 0.628 87.0, 226.0 -0.06
CC044/UncJ f 67.0 0.0   1   0.0 0.0 67.0, 67.0 -0.73
CC051/TauUncJ f 288.0 0.0   1   0.0 0.0 288.0, 288.0 1.84
CC051/TauUncJ m 296.0 0.0   1   0.0 0.0 296.0, 296.0 0.54
CC057/UncJ f 145.0 8.4853   2   6.0 0.0585 139.0, 151.0 0.18
CC057/UncJ m 346.0 11.314   2   8.0 0.0327 338.0, 354.0 0.75
CC059/TauUncJ f 173.5 14.978   4 7.4889 0.0863 153.0, 188.0 0.51
CC059/TauUncJ m 297.0 240.4   5 107.5 0.8093 31.0, 580.0 0.54
CC060/UncJ f 76.0 0.0   1   0.0 0.0 76.0, 76.0 -0.62
CC060/UncJ m 85.0 0.0   1   0.0 0.0 85.0, 85.0 -0.36
CC061/GeniUncJ f 158.7 38.004   3 21.942 0.2395 131.0, 202.0 0.33
CC061/GeniUncJ m 698.5 659.7   2   466.5 0.9445 232.0, 1165.0 2.25
CC074/UncJ f 246.0 0.0   1   0.0 0.0 246.0, 246.0 1.35
CC074/UncJ m 1511.0 0.0   1   0.0 0.0 1511.0, 1511.0 5.71
CC075/UncJ f 115.0 131.5   2   93.0 1.1437 22.0, 208.0 -0.17
CC075/UncJ m 42.0 0.0   1   0.0 0.0 42.0, 42.0 -0.54
CC078/TauUncJ f 57.67 68.65   3 39.633 1.1904 8.0, 136.0 -0.84
CC078/TauUncJ m 49.0 24.88   3 14.364 0.5077 27.0, 76.0 -0.51
CC079/TauUncJ f 116.0 0.0   1   0.0 0.0 116.0, 116.0 -0.16
CC079/TauUncJ m 104.5 122.3   2   86.5 1.1706 18.0, 191.0 -0.28
CC080/TauUncJ f 131.5 119.5   2   84.5 0.9088 47.0, 216.0 0.02
CC080/TauUncJ m 91.0 0.0   1   0.0 0.0 91.0, 91.0 -0.33
CC084/TauJ f 117.5 3.5355   2   2.5 0.0301 115.0, 120.0 -0.14
CC084/TauJ m 42.5 6.364   2   4.5 0.1497 38.0, 47.0 -0.54
NOD/ShiLtJ f 115.8 57.5   8 20.33 0.4968 12.0, 173.0 -0.16
NOD/ShiLtJ m 134.4 125.0   11 37.679 0.9301 19.0, 468.0 -0.15
NZO/HlLtJ f 141.3 86.9   3 50.17 0.6149 41.0, 193.0 0.13
NZO/HlLtJ m 68.5 6.364   2   4.5 0.0929 64.0, 73.0 -0.43
PWK/PhJ f 152.7 231.5   9 77.16 1.5162 4.0, 708.0 0.27
PWK/PhJ m 60.62 86.54   8 30.598 1.4275 14.0, 273.0 -0.46
WSB/EiJ f 121.4 60.52   8 21.396 0.4986 24.0, 216.0 -0.1
WSB/EiJ m 102.2 92.58   6 37.795 0.9062 21.0, 246.0 -0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 56.6666666667 85.6606260208 225.6403960278 -112.3070626945
129S1/SvImJ m 98.5 74.1842782381 244.835542199 -47.835542199
A/J f 393.8333333333 60.57120954 513.315803207 274.3508634597
A/J m 162.2 66.3524356008 293.0864879525 31.3135120475
C57BL/6J f 156.6428571429 39.6531646646 234.8624946309 78.4232196548
C57BL/6J m 171.8181818182 44.7348029562 260.061833994 83.5745296423
CAST/EiJ f 71.5 46.9182571616 164.0507231969 -21.0507231969
CAST/EiJ m 110.5 52.4562061996 213.9748542175 7.0251457825
CC002/UncJ f 108.75 74.1842782381 255.085542199 -37.585542199
CC002/UncJ m 122.75 74.1842782381 269.085542199 -23.585542199
CC003/UncJ f 472.5 104.9124123991 679.449708435 265.550291565
CC003/UncJ m 172.3333333333 85.6606260208 341.3070626945 3.3596039722
CC005/TauUncJ f 103.6666666667 85.6606260208 272.6403960278 -65.3070626945
CC005/TauUncJ m 20.0 104.9124123991 226.949708435 -186.949708435
CC006/TauUncJ f 34.5 104.9124123991 241.449708435 -172.449708435
CC006/TauUncJ m 157.5 104.9124123991 364.449708435 -49.449708435
CC009/UncJ f 63.0 104.9124123991 269.949708435 -143.949708435
CC009/UncJ m 33.0 104.9124123991 239.949708435 -173.949708435
CC011/UncJ f 124.3333333333 85.6606260208 293.3070626945 -44.6403960278
CC011/UncJ m 211.6666666667 85.6606260208 380.6403960278 42.6929373055
CC013/GeniUncJ f 117.5 104.9124123991 324.449708435 -89.449708435
CC013/GeniUncJ m 591.0 104.9124123991 797.949708435 384.050291565
CC016/GeniUncJ f 103.0 85.6606260208 271.9737293612 -65.9737293612
CC016/GeniUncJ m 64.0 74.1842782381 210.335542199 -82.335542199
CC017/UncJ f 73.5 104.9124123991 280.449708435 -133.449708435
CC017/UncJ m 27.0 85.6606260208 195.9737293612 -141.9737293612
CC018/UncJ f 228.6666666667 85.6606260208 397.6403960279 59.6929373055
CC018/UncJ m 50.0 104.9124123991 256.949708435 -156.949708435
CC019/TauUncJ f 174.5 74.1842782381 320.835542199 28.164457801
CC019/TauUncJ m 136.75 74.1842782381 283.085542199 -9.585542199
CC025/GeniUncJ f 132.0 85.6606260208 300.9737293612 -36.9737293612
CC025/GeniUncJ m 78.3333333333 85.6606260208 247.3070626945 -90.6403960278
CC027/GeniUncJ f 141.0 104.9124123991 347.949708435 -65.949708435
CC027/GeniUncJ m 137.5 74.1842782381 283.835542199 -8.835542199
CC028/GeniUncJ f 49.0 85.6606260208 217.9737293612 -119.9737293612
CC028/GeniUncJ m 129.3333333333 85.6606260208 298.3070626945 -39.6403960278
CC030/GeniUncJ f 56.0 104.9124123991 262.949708435 -150.949708435
CC030/GeniUncJ m 191.5 104.9124123991 398.449708435 -15.449708435
CC033/GeniUncJ f 248.0 104.9124123991 454.949708435 41.050291565
CC033/GeniUncJ m 86.5 104.9124123991 293.449708435 -120.449708435
CC036/UncJ f 96.0 85.6606260208 264.9737293612 -72.9737293612
CC036/UncJ m 114.6666666667 85.6606260208 283.6403960278 -54.3070626945
CC037/TauUncJ f 126.5 104.9124123991 333.449708435 -80.449708435
CC037/TauUncJ m 88.0 85.6606260208 256.9737293612 -80.9737293612
CC040/TauUncJ f 64.0 85.6606260208 232.9737293612 -104.9737293612
CC040/TauUncJ m 83.3333333333 85.6606260208 252.3070626945 -85.6403960278
CC041/TauUncJ f 233.6666666667 85.6606260208 402.6403960278 64.6929373055
CC041/TauUncJ m 132.0 104.9124123991 338.949708435 -74.949708435
CC043/GeniUncJ f 109.5 104.9124123991 316.449708435 -97.449708435
CC043/GeniUncJ m 156.5 104.9124123991 363.449708435 -50.449708435
CC057/UncJ f 145.0 104.9124123991 351.949708435 -61.949708435
CC057/UncJ m 346.0 104.9124123991 552.949708435 139.050291565
CC059/TauUncJ f 173.5 74.1842782381 319.835542199 27.164457801
CC059/TauUncJ m 297.0 66.3524356008 427.8864879525 166.1135120475
CC061/GeniUncJ f 158.6666666667 85.6606260208 327.6403960278 -10.3070626945
CC061/GeniUncJ m 698.5 104.9124123991 905.449708435 491.550291565
CC078/TauUncJ f 57.6666666667 85.6606260208 226.6403960278 -111.3070626945
CC078/TauUncJ m 49.0 85.6606260208 217.9737293612 -119.9737293612
CC084/TauJ f 117.5 104.9124123991 324.449708435 -89.449708435
CC084/TauJ m 42.5 104.9124123991 249.449708435 -164.449708435
NOD/ShiLtJ f 115.75 52.4562061996 219.2248542175 12.2751457825
NOD/ShiLtJ m 134.3636363636 44.7348029562 222.6072885395 46.1199841878
NZO/HlLtJ f 141.3333333333 85.6606260208 310.3070626945 -27.6403960279
NZO/HlLtJ m 68.5 104.9124123991 275.449708435 -138.449708435
PWK/PhJ f 152.6666666667 49.456185492 250.2236947993 55.109638534
PWK/PhJ m 60.625 52.4562061996 164.0998542175 -42.8498542175
WSB/EiJ f 121.375 52.4562061996 224.8498542175 17.9001457825
WSB/EiJ m 102.1666666667 60.57120954 221.6491365403 -17.315803207


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 77.5833333333 56.6591784003 189.3489498315 -34.1822831649
A/J both 278.0166666667 44.9208112552 366.6272378978 189.4060954355
C57BL/6J both 164.2305194805 29.8896974869 223.190789659 105.270249302
CAST/EiJ both 91.0 35.1886928712 160.4130423977 21.5869576023
CC002/UncJ both 115.75 52.4562061996 219.2248542175 12.2751457825
CC003/UncJ both 322.4166666667 67.7206710054 456.0021290452 188.8312042881
CC005/TauUncJ both 61.8333333333 67.7206710054 195.4187957119 -71.7521290452
CC006/TauUncJ both 96.0 74.1842782381 242.335542199 -50.335542199
CC009/UncJ both 48.0 74.1842782381 194.335542199 -98.335542199
CC011/UncJ both 168.0 60.57120954 287.4824698737 48.5175301263
CC013/GeniUncJ both 354.25 74.1842782381 500.585542199 207.914457801
CC016/GeniUncJ both 83.5 56.6591784003 195.2656164982 -28.2656164982
CC017/UncJ both 50.25 67.7206710054 183.8354623785 -83.3354623786
CC018/UncJ both 139.3333333333 67.7206710054 272.9187957119 5.7478709548
CC019/TauUncJ both 155.625 52.4562061996 259.0998542175 52.1501457825
CC025/GeniUncJ both 105.1666666667 60.57120954 224.6491365403 -14.315803207
CC027/GeniUncJ both 139.25 64.2454695156 265.9802970209 12.5197029791
CC028/GeniUncJ both 89.1666666667 60.57120954 208.6491365403 -30.315803207
CC030/GeniUncJ both 123.75 74.1842782381 270.085542199 -22.585542199
CC033/GeniUncJ both 167.25 74.1842782381 313.585542199 20.914457801
CC036/UncJ both 105.3333333333 60.57120954 224.815803207 -14.1491365403
CC037/TauUncJ both 107.25 67.7206710054 240.8354623786 -26.3354623786
CC040/TauUncJ both 73.6666666667 60.57120954 193.1491365403 -45.815803207
CC041/TauUncJ both 182.8333333333 67.7206710054 316.4187957119 49.2478709548
CC043/GeniUncJ both 133.0 74.1842782381 279.335542199 -13.335542199
CC057/UncJ both 245.5 74.1842782381 391.835542199 99.164457801
CC059/TauUncJ both 235.25 49.7643267006 333.4148659644 137.0851340356
CC061/GeniUncJ both 428.5833333333 67.7206710054 562.1687957119 294.9978709548
CC078/TauUncJ both 53.3333333333 60.57120954 172.815803207 -66.1491365403
CC084/TauJ both 80.0 74.1842782381 226.335542199 -66.335542199
NOD/ShiLtJ both 125.0568181818 34.4704807204 193.0531188251 57.0605175386
NZO/HlLtJ both 104.9166666667 67.7206710054 238.5021290452 -28.6687957119
PWK/PhJ both 106.6458333333 36.0470798133 177.752125589 35.5395410776
WSB/EiJ both 111.7708333333 40.0640892633 190.8010586627 32.740608004




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA