Project measure / variable:   CSNA03   pct_omit_in_rev_JAX

ID, description, units MPD:110468   pct_omit_in_rev_JAX   percentage of responses considered omissions (reversal learning assay), founders   [%]  reversal  
Data set, strains CSNA03   inbred w/CC8   8 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses considered omissions (reversal learning assay), founders reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means17.397   % 26.796   %
Median of the strain means13.806   % 25.207   %
SD of the strain means± 11.884 ± 13.063
Coefficient of variation (CV)0.6831 0.4875
Min–max range of strain means4.6727   –   35.769   % 8.4693   –   49.476   %
Mean sample size per strain7.4   mice 6.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2452.0637 2452.0637 4.5405 0.0356
strain 7 11543.0435 1649.0062 3.0535 0.006
sex:strain 7 1884.596 269.228 0.4985 0.8335
Residuals 97 52383.9234 540.0404


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 35.769 30.081   3 17.367 0.841 9.375, 68.52 1.55
129S1/SvImJ m 38.094 31.399   4 15.699 0.8242 17.857, 84.88 0.86
A/J f 20.995 15.561   6 6.3526 0.7411 6.1224, 44.681 0.3
A/J m 49.476 64.9   5 29.025 1.3118 2.0202, 161.0 1.74
C57BL/6J f 12.942 9.8965   14 2.645 0.7647 0.75758, 33.645 -0.37
C57BL/6J m 25.986 24.534   11 7.3973 0.9441 2.7624, 83.48 -0.06
CAST/EiJ f 4.6727 2.4244   10 0.76666 0.5188 2.0408, 7.9602 -1.07
CAST/EiJ m 13.263 14.78   8 5.2256 1.1144 2.0134, 44.0 -1.04
NOD/ShiLtJ f 10.258 6.6779   7 2.524 0.651 2.5, 22.222 -0.6
NOD/ShiLtJ m 23.677 28.075   11 8.465 1.1858 1.1236, 90.0 -0.24
NZO/HlLtJ f 14.671 6.2002   3 3.5797 0.4226 8.1081, 20.43 -0.23
NZO/HlLtJ m 24.429 22.327   2   15.787 0.9139 8.642, 40.217 -0.18
PWK/PhJ f 6.0595 3.6583   8 1.2934 0.6037 1.7241, 11.224 -0.95
PWK/PhJ m 8.4693 8.7681   8 3.1 1.0353 1.5152, 28.037 -1.4
WSB/EiJ f 33.812 34.994   8 12.372 1.035 1.1561, 100.0 1.38
WSB/EiJ m 30.976 26.234   5 11.732 0.8469 4.2553, 74.23 0.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 35.769 13.4169103212 62.3978529992 9.1401470008
129S1/SvImJ m 38.09425 11.6193851785 61.155513171 15.032986829
A/J f 20.9954 9.4871882707 39.824842531 2.165957469
A/J m 49.47624 10.3926940463 70.1028608389 28.8496191611
C57BL/6J f 12.9420485714 6.2108226261 25.2688122417 0.6152849011
C57BL/6J m 25.9856272727 7.0067528967 39.8920922054 12.07916234
CAST/EiJ f 4.67272 7.348744435 19.2579434682 -9.9125034682
CAST/EiJ m 13.26345 8.2161460529 29.5702255709 -3.0433255709
NOD/ShiLtJ f 10.2576857143 8.7834295914 27.690362077 -7.1749906484
NOD/ShiLtJ m 23.6765545455 7.0067528967 37.5830194781 9.7700896128
NZO/HlLtJ f 14.6713666667 13.4169103212 41.3002196659 -11.9574863326
NZO/HlLtJ m 24.4295 16.4322921059 57.0430511419 -8.1840511419
PWK/PhJ f 6.059475 8.2161460529 22.3662505709 -10.2473005709
PWK/PhJ m 8.469275 8.2161460529 24.7760505709 -7.8375005709
WSB/EiJ f 33.81235 8.2161460529 50.1191255709 17.5055744291
WSB/EiJ m 30.97646 10.3926940463 51.6030808389 10.3498391611


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 36.931625 8.8744520182 54.5449556837 19.3182943163
A/J both 35.23582 7.03588713 49.2001083211 21.2715316789
C57BL/6J both 19.4638379221 4.6815837023 28.7554856434 10.1721902008
CAST/EiJ both 8.968085 5.5115583262 19.9070026011 -1.9708326011
NOD/ShiLtJ both 16.9671201299 5.6179004428 28.1170973954 5.8171428643
NZO/HlLtJ both 19.5504333333 10.6069989443 40.6023900722 -1.5015234055
PWK/PhJ both 7.264375 5.8096925892 18.7950065855 -4.2662565855
WSB/EiJ both 32.394405 6.6240687176 45.5413477696 19.2474622304




  GWAS USING LINEAR MIXED MODELS