Project measure / variable:   Wahlsten1   dist_OFT_min3

ID, description, units MPD:10822   dist_OFT_min3   distance traveled in 1 min   [cm]  during minute 3  
Data set, strains Wahlsten1   inbred   21 strains     sex: both     age: 9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Wahlsten1 - distance traveled in 1 min during minute 3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested21 strains21 strains
Mean of the strain means473   cm 447   cm
Median of the strain means509   cm 455   cm
SD of the strain means± 161 ± 153
Coefficient of variation (CV)0.340 0.343
Min–max range of strain means172   –   772   cm 124   –   808   cm
Mean sample size per strain9.7   mice 9.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 83807.0995 83807.0995 4.2752 0.0394
strain 20 9095558.1712 454777.9086 23.1992 < 0.0001
sex:strain 20 387862.8052 19393.1403 0.9893 0.4745
Residuals 354 6939518.741 19603.1603


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 253.0 122.0   10 38.4 0.481 63.0, 459.0 -1.37
129S1/SvImJ m 240.0 70.2   10 22.2 0.292 111.0, 349.0 -1.35
A/J f 172.0 47.5   8 16.8 0.277 112.0, 249.0 -1.87
A/J m 124.0 80.0   9 26.7 0.645 12.8, 214.0 -2.1
AKR/J f 534.0 188.0   10 59.5 0.352 337.0, 884.0 0.38
AKR/J m 449.0 82.9   8 29.3 0.185 314.0, 539.0 0.01
BALB/cByJ f 509.0 71.0   10 22.5 0.14 403.0, 606.0 0.22
BALB/cByJ m 498.0 247.0   10 78.2 0.496 201.0, 1138.0 0.33
BTBR T+ Itpr3tf/J f 474.0 157.0   12 45.4 0.332 182.0, 700.0 0.01
BTBR T+ Itpr3tf/J m 463.0 117.0   6 47.8 0.253 233.0, 546.0 0.1
C3H/HeJ f 206.0 55.7   10 17.6 0.271 95.9, 306.0 -1.66
C3H/HeJ m 242.0 62.8   8 22.2 0.259 129.0, 324.0 -1.34
C57BL/6J f 577.0 92.7   8 32.8 0.161 423.0, 708.0 0.65
C57BL/6J m 485.0 156.0   10 49.3 0.322 230.0, 708.0 0.25
C57L/J f 629.0 80.7   10 25.5 0.128 535.0, 776.0 0.97
C57L/J m 625.0 101.0   8 35.6 0.161 460.0, 768.0 1.16
C58/J f 772.0 354.0   10 112.0 0.459 271.0, 1352.0 1.86
C58/J m 605.0 183.0   10 58.0 0.303 366.0, 1025.0 1.03
CAST/EiJ f 448.0 169.0   10 53.3 0.376 195.0, 810.0 -0.16
CAST/EiJ m 455.0 156.0   9 51.9 0.342 167.0, 694.0 0.05
DBA/2J f 364.0 78.5   10 24.8 0.215 199.0, 454.0 -0.68
DBA/2J m 362.0 138.0   8 48.9 0.382 70.4, 560.0 -0.55
FVB/NJ f 552.0 83.6   10 26.4 0.152 401.0, 663.0 0.49
FVB/NJ m 617.0 113.0   11 34.2 0.184 448.0, 801.0 1.11
MOLF/EiJ f 523.0 115.0   8 40.7 0.22 388.0, 690.0 0.31
MOLF/EiJ m 541.0 64.7   7 24.5 0.12 459.0, 640.0 0.61
NOD/ShiLtJ f 756.0 187.0   12 54.0 0.247 477.0, 1112.0 1.76
NOD/ShiLtJ m 808.0 125.0   12 36.2 0.155 674.0, 1124.0 2.35
NZB/BlNJ f 368.0 127.0   6 51.7 0.344 209.0, 516.0 -0.65
NZB/BlNJ m 379.0 143.0   12 41.3 0.377 99.0, 593.0 -0.44
PERA/EiJ f 463.0 158.0   10 50.1 0.342 300.0, 831.0 -0.06
PERA/EiJ m 363.0 132.0   12 38.0 0.363 232.0, 638.0 -0.55
PL/J f 552.0 181.0   12 52.4 0.328 387.0, 924.0 0.49
PL/J m 500.0 107.0   7 40.4 0.214 390.0, 699.0 0.34
SJL/J f 441.0 58.4   8 20.7 0.133 377.0, 513.0 -0.2
SJL/J m 406.0 110.0   12 31.9 0.272 196.0, 582.0 -0.27
SM/J f 552.0 78.0   14 20.8 0.141 446.0, 691.0 0.49
SM/J m 404.0 200.0   10 63.2 0.495 45.6, 740.0 -0.28
SPRET/EiJ f 254.0 141.0   7 53.4 0.556 69.1, 449.0 -1.36
SPRET/EiJ m 299.0 69.3   2   49.0 0.232 250.0, 348.0 -0.96
SWR/J f 534.0 91.1   10 28.8 0.171 392.0, 672.0 0.38
SWR/J m 523.0 68.8   10 21.8 0.132 407.0, 616.0 0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 252.9 44.2755 339.976 165.824
129S1/SvImJ m 240.2 44.2755 327.276 153.124
A/J f 171.5 49.5015 268.8539 74.1461
A/J m 124.0222 46.6704 215.8084 32.2361
AKR/J f 534.4 44.2755 621.476 447.324
AKR/J m 449.375 49.5015 546.7289 352.0211
BALB/cByJ f 509.1 44.2755 596.176 422.024
BALB/cByJ m 498.5 44.2755 585.576 411.424
BTBR T+ Itpr3tf/J f 474.1667 40.4178 553.6558 394.6775
BTBR T+ Itpr3tf/J m 462.8333 57.1594 575.248 350.4187
C3H/HeJ f 205.69 44.2755 292.766 118.614
C3H/HeJ m 242.5 49.5015 339.8539 145.1461
C57BL/6J f 577.25 49.5015 674.6039 479.8961
C57BL/6J m 484.8 44.2755 571.876 397.724
C57L/J f 628.8 44.2755 715.876 541.724
C57L/J m 625.375 49.5015 722.7289 528.0211
C58/J f 772.2 44.2755 859.276 685.124
C58/J m 604.6 44.2755 691.676 517.524
CAST/EiJ f 448.5 44.2755 535.576 361.424
CAST/EiJ m 455.1111 46.6704 546.8973 363.3249
DBA/2J f 364.5 44.2755 451.576 277.424
DBA/2J m 362.3 49.5015 459.6539 264.9461
FVB/NJ f 551.5 44.2755 638.576 464.424
FVB/NJ m 616.6364 42.215 699.6601 533.6127
MOLF/EiJ f 523.0 49.5015 620.3539 425.6461
MOLF/EiJ m 540.7143 52.9193 644.79 436.6386
NOD/ShiLtJ f 756.5 40.4178 835.9892 677.0108
NOD/ShiLtJ m 808.0 40.4178 887.4892 728.5108
NZB/BlNJ f 368.0 57.1594 480.4146 255.5854
NZB/BlNJ m 379.1667 40.4178 458.6558 299.6775
PERA/EiJ f 463.1 44.2755 550.176 376.024
PERA/EiJ m 362.8333 40.4178 442.3225 283.3442
PL/J f 552.4167 40.4178 631.9058 472.9275
PL/J m 500.1429 52.9193 604.2186 396.0671
SJL/J f 441.0 49.5015 538.3539 343.6461
SJL/J m 405.6667 40.4178 485.1558 326.1775
SM/J f 551.7143 37.4196 625.3069 478.1216
SM/J m 403.64 44.2755 490.716 316.564
SPRET/EiJ f 254.0143 52.9193 358.09 149.9386
SPRET/EiJ m 299.0 99.0029 493.7079 104.2921
SWR/J f 534.3 44.2755 621.376 447.224
SWR/J m 522.8 44.2755 609.876 435.724


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 246.55 31.3075 308.122 184.978
A/J both 147.7611 34.0166 214.6612 80.861
AKR/J both 491.8875 33.2066 557.1945 426.5805
BALB/cByJ both 503.8 31.3075 565.372 442.228
BTBR T+ Itpr3tf/J both 468.5 35.0028 537.3396 399.6604
C3H/HeJ both 224.095 33.2066 289.402 158.788
C57BL/6J both 531.025 33.2066 596.332 465.718
C57L/J both 627.0875 33.2066 692.3945 561.7805
C58/J both 688.4 31.3075 749.972 626.828
CAST/EiJ both 451.8056 32.1654 515.0648 388.5463
DBA/2J both 363.4 33.2066 428.707 298.093
FVB/NJ both 584.0682 30.5877 644.2246 523.9118
MOLF/EiJ both 531.8571 36.2314 603.1129 460.6014
NOD/ShiLtJ both 782.25 28.5797 838.4573 726.0427
NZB/BlNJ both 373.5833 35.0028 442.423 304.7437
PERA/EiJ both 412.9667 29.9746 471.9174 354.0159
PL/J both 526.2798 33.2943 591.7593 460.8002
SJL/J both 423.3333 31.9531 486.175 360.4916
SM/J both 477.6771 28.9851 534.6818 420.6725
SPRET/EiJ both 276.5071 56.1294 386.8961 166.1182
SWR/J both 528.55 31.3075 590.122 466.978




  GWAS USING LINEAR MIXED MODELS