Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:96306379-99347105

Filter by:
103 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hsf3 X 96306178 to 96456294 150116 - protein coding gene heat shock transcription factor 3
Gm18171 X 96308355 to 96309014 659 - pseudogene predicted gene, 18171
Tssr161568 X 96334327 to 96334349 22 + TSS region transcription start site region 161568
Tssr161569 X 96341733 to 96341742 9 + TSS region transcription start site region 161569
Gm14933 X 96358727 to 96359681 954 - pseudogene predicted gene 14933
Tssr161570 X 96455397 to 96455411 14 + TSS region transcription start site region 161570
Tssr161571 X 96455412 to 96455450 38 + TSS region transcription start site region 161571
Heph X 96455436 to 96574485 119049 + protein coding gene hephaestin
Tssr161572 X 96455496 to 96455497 1 + TSS region transcription start site region 161572
Tssr5650 X 96455502 to 96455505 3 + TSS region transcription start site region 5650
Tssr161573 X 96455511 to 96455522 11 + TSS region transcription start site region 161573
Tssr161574 X 96455529 to 96455599 70 + TSS region transcription start site region 161574
Tssr161575 X 96455612 to 96455636 24 + TSS region transcription start site region 161575
Tssr161576 X 96456344 to 96456356 12 + TSS region transcription start site region 161576
Tssr161577 X 96456362 to 96456388 26 + TSS region transcription start site region 161577
Tssr161578 X 96456404 to 96456441 37 + TSS region transcription start site region 161578
Tssr161579 X 96456490 to 96456502 12 + TSS region transcription start site region 161579
Rpl17-ps8 X 96484859 to 96485479 620 + pseudogene ribosomal protein L17, pseudogene 8
Gm14935 X 96548629 to 96550333 1704 + pseudogene predicted gene 14935
Tssr161580 X 96713459 to 96713475 16 + TSS region transcription start site region 161580
Gpr165 X 96713468 to 96719388 5920 + protein coding gene G protein-coupled receptor 165
Tssr161581 X 96713486 to 96713497 11 + TSS region transcription start site region 161581
Tssr161582 X 96713508 to 96713520 12 + TSS region transcription start site region 161582
Tssr161583 X 96713547 to 96713554 7 + TSS region transcription start site region 161583
Gm16394 X 96885509 to 96887873 2364 - pseudogene predicted gene 16394
1700125M20Rik X 96934091 to 96934660 569 unclassified gene RIKEN cDNA 1700125M20 gene
Gm14803 X 96934690 to 96935224 534 - pseudogene predicted gene 14803
Tssr163823 X 96935244 to 96935250 6 - TSS region transcription start site region 163823
Gm9059 X 96966257 to 96966648 391 - pseudogene predicted gene 9059
Gm39527 X 96966832 to 96991054 24222 + lncRNA gene predicted gene, 39527
Gm9060 X 97047716 to 97048511 795 - pseudogene predicted gene 9060
Pgr15l X 97072596 to 97082104 9508 + protein coding gene G protein-coupled receptor 15-like
Gm14800 X 97161655 to 97162689 1034 - pseudogene predicted gene 14800
Eda2r X 97333840 to 97377216 43376 - protein coding gene ectodysplasin A2 receptor
Gm18111 X 97365500 to 97366173 673 + pseudogene predicted gene, 18111
Tssr163824 X 97376456 to 97376465 9 - TSS region transcription start site region 163824
Tssr163825 X 97376494 to 97376508 14 - TSS region transcription start site region 163825
Tssr163826 X 97377163 to 97377187 24 - TSS region transcription start site region 163826
Tssr163827 X 97377190 to 97377195 5 - TSS region transcription start site region 163827
Tssr161584 X 97526986 to 97526987 1 + TSS region transcription start site region 161584
Gm9062 X 97826379 to 97827105 726 + pseudogene predicted gene 9062
Gm14802 X 98040375 to 98042259 1884 + pseudogene predicted gene 14802
DXMit114 X 98146308 to 98146453 145 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 114
Modc2 X 98146308 to 98146453 145 QTL modifier of Odc2
Tssr161585 X 98148719 to 98148782 63 + TSS region transcription start site region 161585
Ar X 98148769 to 98323215 174446 + protein coding gene androgen receptor
Tssr161586 X 98149666 to 98149714 48 + TSS region transcription start site region 161586
Cpgi22845 X 98149887 to 98150134 247 CpG island CpG island 22845
Cpgi22846 X 98150541 to 98151064 523 CpG island CpG island 22846
Tssr163828 X 98259743 to 98259773 30 - TSS region transcription start site region 163828
Gm14811 X 98483790 to 98483906 116 + pseudogene predicted gene 14811
Gm14815 X 98513900 to 98514387 487 - pseudogene predicted gene 14815
Gm14810 X 98544397 to 98544882 485 - pseudogene predicted gene 14810
Ophn1 X 98554277 to 98891025 336748 - protein coding gene oligophrenin 1
Tssr163829 X 98599451 to 98599458 7 - TSS region transcription start site region 163829
Gm27554 X 98727315 to 98727412 97 - miRNA gene predicted gene, 27554
Tssr163830 X 98757500 to 98757508 8 - TSS region transcription start site region 163830
Tssr163831 X 98757514 to 98757525 11 - TSS region transcription start site region 163831
Gm26000 X 98814775 to 98814881 106 + snRNA gene predicted gene, 26000
Tssr163832 X 98853388 to 98853394 6 - TSS region transcription start site region 163832
Tssr163833 X 98888396 to 98888401 5 - TSS region transcription start site region 163833
Cpgi22847 X 98890059 to 98891195 1136 CpG island CpG island 22847
Tssr163834 X 98890223 to 98890235 12 - TSS region transcription start site region 163834
Tssr163835 X 98890430 to 98890488 58 - TSS region transcription start site region 163835
Tssr163836 X 98890538 to 98890561 23 - TSS region transcription start site region 163836
Tssr163837 X 98890566 to 98890583 17 - TSS region transcription start site region 163837
Tssr163838 X 98890619 to 98890638 19 - TSS region transcription start site region 163838
Tssr163839 X 98890913 to 98890991 78 - TSS region transcription start site region 163839
Tssr163840 X 98891008 to 98891047 39 - TSS region transcription start site region 163840
Tssr161587 X 98936314 to 98936318 4 + TSS region transcription start site region 161587
Yipf6 X 98936321 to 98949021 12700 + protein coding gene Yip1 domain family, member 6
Cpgi22848 X 98936825 to 98938494 1669 CpG island CpG island 22848
Tssr161588 X 98937468 to 98937538 70 + TSS region transcription start site region 161588
Tssr161589 X 98937748 to 98937796 48 + TSS region transcription start site region 161589
Tssr161590 X 98938178 to 98938198 20 + TSS region transcription start site region 161590
Tssr161591 X 98938200 to 98938229 29 + TSS region transcription start site region 161591
Tssr161592 X 98948595 to 98948599 4 + TSS region transcription start site region 161592
Gm14813 X 98962084 to 98962478 394 - pseudogene predicted gene 14813
Tssr161593 X 99003224 to 99003288 64 + TSS region transcription start site region 161593
Stard8 X 99003248 to 99074728 71480 + protein coding gene START domain containing 8
Tssr161594 X 99003328 to 99003339 11 + TSS region transcription start site region 161594
Tssr163841 X 99030580 to 99030589 9 - TSS region transcription start site region 163841
DXDcr2 X 99035899 to 99035994 95 DNA segment DNA Segment, Chr X, Derry C. Roopenian 2
Cpgi22849 X 99042600 to 99043134 534 CpG island CpG island 22849
Tssr161595 X 99042604 to 99042613 9 + TSS region transcription start site region 161595
Tssr161596 X 99042620 to 99042661 41 + TSS region transcription start site region 161596
Tssr161597 X 99042989 to 99043017 28 + TSS region transcription start site region 161597
Tssr161598 X 99044003 to 99044016 13 + TSS region transcription start site region 161598
Gm5760 X 99081401 to 99082402 1001 - pseudogene predicted gene 5760
Cpgi22850 X 99135690 to 99137244 1554 CpG island CpG island 22850
Tssr163842 X 99135946 to 99135950 4 - TSS region transcription start site region 163842
Tssr161599 X 99136073 to 99136084 11 + TSS region transcription start site region 161599
Tssr161600 X 99136090 to 99136107 17 + TSS region transcription start site region 161600
Tssr161601 X 99136119 to 99136138 19 + TSS region transcription start site region 161601
Efnb1 X 99136130 to 99148991 12861 + protein coding gene ephrin B1
Tssr161602 X 99136180 to 99136183 3 + TSS region transcription start site region 161602
Tssr161603 X 99147573 to 99147592 19 + TSS region transcription start site region 161603
Gm46674 X 99198691 to 99203088 4397 + lncRNA gene predicted gene, 46674
Cpgi22851 X 99216478 to 99217345 867 CpG island CpG island 22851
DXMit96 X 99231474 to 99231566 92 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 96
Gm39528 X 99287089 to 99320843 33754 + lncRNA gene predicted gene, 39528
Gm30649 X 99288557 to 99291600 3043 - lncRNA gene predicted gene, 30649
Gm30704 X 99330146 to 99334710 4564 - lncRNA gene predicted gene, 30704