Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:7573453-7613460

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp1r3f X 7558562 to 7574281 15719 - protein coding gene protein phosphatase 1, regulatory subunit 3F
Gm36995 X 7558602 to 7605381 46779 - unclassified non-coding RNA gene predicted gene, 36995
Cpgi22568 X 7573235 to 7574728 1493 CpG island CpG island 22568
Flicr X 7573600 to 7581016 7416 + antisense lncRNA gene Foxp3 regulating long intergenic noncoding RNA
Tssr162797 X 7574244 to 7574312 68 - TSS region transcription start site region 162797
Tssr160382 X 7577496 to 7577521 25 + TSS region transcription start site region 160382
Tssr160383 X 7579666 to 7579685 19 + TSS region transcription start site region 160383
Foxp3 X 7579676 to 7595243 15567 + protein coding gene forkhead box P3
Tssr160384 X 7579701 to 7579712 11 + TSS region transcription start site region 160384
Tssr160385 X 7579749 to 7579760 11 + TSS region transcription start site region 160385
Tssr160386 X 7580485 to 7580491 6 + TSS region transcription start site region 160386
Tssr160387 X 7580500 to 7580509 9 + TSS region transcription start site region 160387
Tssr162798 X 7583933 to 7583955 22 - TSS region transcription start site region 162798
Tssr162799 X 7584050 to 7584059 9 - TSS region transcription start site region 162799
Tssr160388 X 7584448 to 7584451 3 + TSS region transcription start site region 160388
Tssr160389 X 7593078 to 7593079 1 + TSS region transcription start site region 160389
Tssr160390 X 7593145 to 7593172 27 + TSS region transcription start site region 160390
Tssr160391 X 7593225 to 7593236 11 + TSS region transcription start site region 160391
Tssr160392 X 7593245 to 7593252 7 + TSS region transcription start site region 160392
Tssr160393 X 7593453 to 7593460 7 + TSS region transcription start site region 160393
Tssr160394 X 7593503 to 7593511 8 + TSS region transcription start site region 160394
Ccdc22 X 7593809 to 7605420 11611 - protein coding gene coiled-coil domain containing 22
Tssr162800 X 7595052 to 7595064 12 - TSS region transcription start site region 162800
Tssr162801 X 7595210 to 7595219 9 - TSS region transcription start site region 162801
Tssr162802 X 7595442 to 7595450 8 - TSS region transcription start site region 162802
Tssr162803 X 7605320 to 7605368 48 - TSS region transcription start site region 162803
Tssr162804 X 7605374 to 7605402 28 - TSS region transcription start site region 162804
Cacna1f X 7607083 to 7635196 28113 + protein coding gene calcium channel, voltage-dependent, alpha 1F subunit
Tssr160395 X 7607108 to 7607127 19 + TSS region transcription start site region 160395
Cpgi22569 X 7610680 to 7611011 331 CpG island CpG island 22569
DXMit26 X 7612495 to 7612712 217 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 26