Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:7260056-7460192

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clcn5 X 7153810 to 7319358 165548 - protein coding gene chloride channel, voltage-sensitive 5
DXImx35 X 7276832 to 7277076 244 DNA segment DNA segment, Chr X, Immunex 35
DXImx36 X 7312379 to 7312610 231 DNA segment DNA segment, Chr X, Immunex 36
DXImx5 X 7315495 to 7315699 204 DNA segment DNA segment, Chr X, Immunex 5
Cpgi22565 X 7318569 to 7319504 935 CpG island CpG island 22565
Tssr162777 X 7319157 to 7319178 21 - TSS region transcription start site region 162777
Tssr162778 X 7319186 to 7319257 71 - TSS region transcription start site region 162778
Tssr162779 X 7319260 to 7319288 28 - TSS region transcription start site region 162779
Tssr162780 X 7319291 to 7319331 40 - TSS region transcription start site region 162780
DXImx31 X 7321877 to 7322072 195 DNA segment DNA segment, Chr X, Immunex 31
DXImx32 X 7325759 to 7325892 133 DNA segment DNA segment, Chr X, Immunex 32
DXImx34 X 7343074 to 7343236 162 DNA segment DNA segment, Chr X, Immunex 34
DXImx33 X 7344262 to 7344449 187 DNA segment DNA segment, Chr X, Immunex 33
DXMit55 X 7360056 to 7360192 136 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 55
Usp27x X 7372591 to 7375830 3239 - protein coding gene ubiquitin specific peptidase 27, X chromosome
DXImx4 X 7372672 to 7372881 209 DNA segment DNA segment, Chr X, Immunex 4
Cpgi22566 X 7374952 to 7376349 1397 CpG island CpG island 22566
Gm14379 X 7375925 to 7378042 2117 + lncRNA gene predicted gene 14379
DXImx24 X 7399426 to 7399559 133 DNA segment DNA segment, Chr X, Immunex 24
DXImx7 X 7407644 to 7407888 244 DNA segment DNA segment, Chr X, Immunex 7
2010204K13Rik X 7411817 to 7422988 11171 - lncRNA gene RIKEN cDNA 2010204K13 gene
Tssr162781 X 7412734 to 7412741 7 - TSS region transcription start site region 162781
Tssr5584 X 7412744 to 7412747 3 - TSS region transcription start site region 5584
Tssr162782 X 7412756 to 7412772 16 - TSS region transcription start site region 162782
Tssr162783 X 7412774 to 7412788 14 - TSS region transcription start site region 162783
Tssr162784 X 7421039 to 7421085 46 - TSS region transcription start site region 162784
Tssr162785 X 7421087 to 7421121 34 - TSS region transcription start site region 162785
Tssr162786 X 7421123 to 7421132 9 - TSS region transcription start site region 162786
Cpgi22567 X 7422651 to 7422880 229 CpG island CpG island 22567
Tssr162787 X 7422930 to 7422941 11 - TSS region transcription start site region 162787
Tssr162788 X 7422949 to 7422974 25 - TSS region transcription start site region 162788
Tssr162789 X 7422977 to 7422996 19 - TSS region transcription start site region 162789
DXImx8 X 7424809 to 7425033 224 DNA segment DNA segment, Chr X, Immunex 8
Tssr162790 X 7429639 to 7429655 16 - TSS region transcription start site region 162790
Tssr160369 X 7429741 to 7429790 49 + TSS region transcription start site region 160369
Gm32829 X 7458613 to 7473975 15362 - lncRNA gene predicted gene, 32829
Dbts2 X 151324042 to 7360056 -143963986 QTL diabetes 2