Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:56988106-57206540

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Brs3 X 57043074 to 57048758 5684 + protein coding gene bombesin-like receptor 3
Cpgi22732 X 57053140 to 57054130 990 CpG island CpG island 22732
Tssr5622 X 57053281 to 57053301 20 + TSS region transcription start site region 5622
Tssr161014 X 57053549 to 57053597 48 + TSS region transcription start site region 161014
Htatsf1 X 57053583 to 57067183 13600 + protein coding gene HIV TAT specific factor 1
Tssr161015 X 57053849 to 57053868 19 + TSS region transcription start site region 161015
Tssr161016 X 57053880 to 57053908 28 + TSS region transcription start site region 161016
Tssr161017 X 57066017 to 57066028 11 + TSS region transcription start site region 161017
Tssr161018 X 57066031 to 57066047 16 + TSS region transcription start site region 161018
Tssr161019 X 57066164 to 57066179 15 + TSS region transcription start site region 161019
Tssr161020 X 57066301 to 57066314 13 + TSS region transcription start site region 161020
Tssr161021 X 57066495 to 57066510 15 + TSS region transcription start site region 161021
DXMit75 X 57068354 to 57068454 100 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 75
Pbwg21 X 57068354 to 57068454 100 QTL postnatal body weight growth 21
Pbwg7 X 57068354 to 57068454 100 QTL postnatal body weight growth 7
Vgll1 X 57088106 to 57106540 18434 + protein coding gene vestigial like family member 1
Tssr163428 X 57176870 to 57176878 8 - TSS region transcription start site region 163428
Tssr161022 X 57179783 to 57179790 7 + TSS region transcription start site region 161022
Tssr163429 X 57181479 to 57181486 7 - TSS region transcription start site region 163429
Tssr163430 X 57182629 to 57182636 7 - TSS region transcription start site region 163430
Tssr163431 X 57188920 to 57188926 6 - TSS region transcription start site region 163431
Tssr161023 X 57196386 to 57196411 25 + TSS region transcription start site region 161023
Tssr161024 X 57196588 to 57196596 8 + TSS region transcription start site region 161024
Tssr163432 X 57200396 to 57200425 29 - TSS region transcription start site region 163432
Tssr161025 X 57200510 to 57200519 9 + TSS region transcription start site region 161025
Tssr161026 X 57200532 to 57200546 14 + TSS region transcription start site region 161026
Tssr161027 X 57200557 to 57200571 14 + TSS region transcription start site region 161027
Tssr161028 X 57200613 to 57200633 20 + TSS region transcription start site region 161028
Gm14718 X 57200643 to 57204378 3735 + antisense lncRNA gene predicted gene 14718