Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:141279049-142170141

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col4a6 X 141165403 to 141474076 308673 - protein coding gene collagen, type IV, alpha 6
Gm15077 X 141302349 to 141302710 361 - pseudogene predicted gene 15077
Gm15078 X 141356178 to 141356956 778 + pseudogene predicted gene 15078
Gm15079 X 141434973 to 141435188 215 + pseudogene predicted gene 15079
Tssr5692 X 141437846 to 141437848 2 + TSS region transcription start site region 5692
DXMit67 X 141442969 to 141443140 171 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 67
Tssr164268 X 141473853 to 141473858 5 - TSS region transcription start site region 164268
Tssr164269 X 141473880 to 141473894 14 - TSS region transcription start site region 164269
Tssr164270 X 141474034 to 141474091 57 - TSS region transcription start site region 164270
Tssr162226 X 141475385 to 141475468 83 + TSS region transcription start site region 162226
Col4a5 X 141475385 to 141689234 213849 + protein coding gene collagen, type IV, alpha 5
Tssr162227 X 141475600 to 141475612 12 + TSS region transcription start site region 162227
Tssr5693 X 141627897 to 141627903 6 + TSS region transcription start site region 5693
Gm15268 X 141627959 to 141628468 509 + pseudogene predicted gene 15268
Gm15282 X 141680442 to 141680741 299 - pseudogene predicted gene 15282
Irs4 X 141710998 to 141725217 14219 - protein coding gene insulin receptor substrate 4
Cpgi22974 X 141721603 to 141722091 488 CpG island CpG island 22974
Cpgi22975 X 141724049 to 141725141 1092 CpG island CpG island 22975
Gm15295 X 141724838 to 141726163 1325 + antisense lncRNA gene predicted gene 15295
Tssr164271 X 141725181 to 141725195 14 - TSS region transcription start site region 164271
DXMit132 X 141756814 to 141756928 114 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 132
Gm15297 X 141777180 to 141777662 482 + pseudogene predicted gene 15297
Hmgn2l6 X 141870135 to 141870401 266 - pseudogene high-mobility group nucleosomal binding domain 2-like 6
Tssr164272 X 141870494 to 141870503 9 - TSS region transcription start site region 164272
Gm15294 X 141873409 to 141875235 1826 - pseudogene predicted gene 15294
Gm15298 X 141900582 to 141902455 1873 - lincRNA gene predicted gene 15298
Tssr162228 X 141980071 to 141980080 9 + TSS region transcription start site region 162228
Gm6368 X 141980175 to 141982321 2146 + pseudogene predicted gene 6368
Tssr162229 X 141980280 to 141980306 26 + TSS region transcription start site region 162229
Tssr5694 X 141980772 to 141980793 21 + TSS region transcription start site region 5694
Tssr162230 X 141981578 to 141981597 19 + TSS region transcription start site region 162230
Gm5762 X 142023346 to 142023603 257 - pseudogene predicted gene 5762
DXMit234 X 142059365 to 142059477 112 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 234
Tssr162231 X 142060784 to 142060799 15 + TSS region transcription start site region 162231
Gm6373 X 142060855 to 142061214 359 + pseudogene predicted gene 6373
Gucy2f X 142081160 to 142196931 115771 - protein coding gene guanylate cyclase 2f