Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:140544599-140887715

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tsc22d3 X 140539528 to 140600522 60994 - protein coding gene TSC22 domain family, member 3
Tssr164247 X 140548588 to 140548599 11 - TSS region transcription start site region 164247
Tssr164248 X 140589412 to 140589418 6 - TSS region transcription start site region 164248
Cpgi22972 X 140598271 to 140600653 2382 CpG island CpG island 22972
Tssr164249 X 140598586 to 140598590 4 - TSS region transcription start site region 164249
Tssr5688 X 140598924 to 140598925 1 + TSS region transcription start site region 5688
Tssr164250 X 140599106 to 140599154 48 - TSS region transcription start site region 164250
Tssr164251 X 140599200 to 140599220 20 - TSS region transcription start site region 164251
Tssr164252 X 140599447 to 140599449 2 - TSS region transcription start site region 164252
Tssr164253 X 140599475 to 140599490 15 - TSS region transcription start site region 164253
Tssr164254 X 140599503 to 140599518 15 - TSS region transcription start site region 164254
Tssr164255 X 140599707 to 140599713 6 - TSS region transcription start site region 164255
Tssr164256 X 140600497 to 140600525 28 - TSS region transcription start site region 164256
Gm15047 X 140621683 to 140622136 453 - pseudogene predicted gene 15047
Gm22025 X 140641960 to 140642261 301 - unclassified non-coding RNA gene predicted gene, 22025
Tssr164257 X 140642259 to 140642261 2 - TSS region transcription start site region 164257
Tssr162204 X 140664296 to 140664326 30 + TSS region transcription start site region 162204
Tssr5689 X 140664331 to 140664342 11 + TSS region transcription start site region 5689
Tssr162205 X 140664531 to 140664554 23 + TSS region transcription start site region 162205
Cpgi22973 X 140664546 to 140665813 1267 CpG island CpG island 22973
Tssr162206 X 140664565 to 140664601 36 + TSS region transcription start site region 162206
Mid2 X 140664599 to 140767715 103116 + protein coding gene midline 2
Tssr162207 X 140664697 to 140664729 32 + TSS region transcription start site region 162207
Tssr162208 X 140664831 to 140664850 19 + TSS region transcription start site region 162208
Tssr162209 X 140664871 to 140664882 11 + TSS region transcription start site region 162209
Tssr162210 X 140664908 to 140664942 34 + TSS region transcription start site region 162210
Gm23199 X 140679696 to 140679802 106 + snRNA gene predicted gene, 23199
Eif2c5 X 140776288 to 140796880 20592 + unclassified gene eukaryotic translation initiation factor 2C, 5
Tssr162211 X 140797302 to 140797314 12 + TSS region transcription start site region 162211
Gm6088 X 140797396 to 140799934 2538 + pseudogene predicted gene 6088
Tex13b X 140808307 to 140813433 5126 - protein coding gene testis expressed 13B
Tssr164258 X 140813462 to 140813467 5 - TSS region transcription start site region 164258
Gm7091 X 140821936 to 140822521 585 - pseudogene predicted gene 7091
Tssr164259 X 140822555 to 140822575 20 - TSS region transcription start site region 164259